RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 C19orf54Q5BKX5 351 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 C6orf141Q5SZD1 244 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 ACSM6Q6P461 480 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 TGIF2LXQ8IUE1 241 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 ZNF491Q8N8L2 437 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 SLC37A3Q8NCC5 494 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 OR8B12Q8NGG6 310 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 OR52N4Q8NGI2 321 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 OR56B4Q8NH76 319 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 MYOZ3Q8TDC0 251 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 NTN5Q8WTR8 489 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 DLX4Q92988 240 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 AMELYQ99218 206 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 ABCG5Q9H222 651 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 DUSP21Q9H596 190 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 SEBOXQ9HB31 216 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 ZNF286AQ9HBT8 521 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 AMBNQ9NP70 447 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 CHCHD3Q9NX63 227 aaKnown RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 KIAA1456Q9P272 454 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 VSIG4Q9Y279 399 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 LSM2Q9Y333 95 aaKnown RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 HSPG2P98160 4391 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 DSCAML1Q8TD84 2053 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 A0A087X0M5 115 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 A0A0U1RQV5 110 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 A0A1B0GX30 115 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 A0A1W2PPI3 338 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 PQLC2LA1A4F0 135 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 NCBP2LA6PVI3 153 aaKnown RBP5.25□□□□□ -1.57
ATXN3-236ENST00000556220 HSPA12AO43301 675 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 ENTPD6O75354 484 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 E2F6O75461 281 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 LALBAP00709 142 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 IGKV1D-33P01593 117 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 IGKV1-33P01594 117 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GYPBP06028 91 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 OSMP13725 252 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 ARSBP15848 533 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 SPI1P17947 270 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 VDAC1P21796 283 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 C21orf33P30042 268 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TGFBR1P36897 503 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GNB1P62873 340 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 BLOC1S1P78537 153 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TSPAN31Q12999 210 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 EBI3Q14213 229 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GINS1Q14691 196 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 ZNF684Q5T5D7 378 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 LINC01590Q5TEZ4 76 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 AADACL4Q5VUY2 407 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 RNLSQ5VYX0 342 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 FAM53AQ6NSI3 398 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-236ENST00000556220 SLC16A12Q6ZSM3 486 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 RASSF6Q6ZTQ3 369 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 SHFQ7M4L6 423 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TRAPPC6BQ86SZ2 158 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 ANGPTL5Q86XS5 388 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 SPARTQ8N0X7 666 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 OR6K6Q8NGW6 343 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 OR6N2Q8NGY6 317 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GGHQ92820 318 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 CORO2AQ92828 525 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TOMM40LQ969M1 308 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 KCTD7Q96MP8 289 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 NR1H4Q96RI1 486 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-236ENST00000556220 IL4I1Q96RQ9 567 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 INTS14Q96SY0 518 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 NABP2Q9BQ15 211 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 ST6GALNAC5Q9BVH7 336 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 NMNAT2Q9BZQ4 307 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 CHST6Q9GZX3 395 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 KLK15Q9H2R5 256 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 HIPK2Q9H2X6 1198 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GAL3ST2Q9H3Q3 398 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TUBA4BQ9H853 241 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GNB4Q9HAV0 340 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 RETNQ9HD89 108 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 KRT84Q9NSB2 600 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 LIN7CQ9NUP9 197 aaKnown RBP5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TAS2R3Q9NYW6 316 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 IL20Q9NYY1 176 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 CLEC2DQ9UHP7 191 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 GLS2Q9UI32 602 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 ENPP5Q9UJA9 477 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 PIGLQ9Y2B2 252 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 COX11Q9Y6N1 276 aa5.25□□□□□ -1.57
ATXN3-236ENST00000556220 TRGV10A0A0A0MS01 117 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 ACOD1A6NK06 481 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 FAM183AA6NL82 134 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 C12orf77C9JDV5 145 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 F8VVB4 439 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 F8VWA3 439 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 MGST3O14880 152 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 INMTO95050 263 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 HAND1O96004 215 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 IGF1P05019 195 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 OR8U9P0C7N5 309 aa5.24□□□□□ -1.57
ATXN3-236ENST00000556220 ANXA8P13928 327 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms