RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SUCNR1Q9BXA5 334 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 HEXA-AS1Q9H8Q6 139 aa12.37□□□□□ -0.43
VPS33B-205ENST00000556096 MYO18BQ8IUG5 2567 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 HIVEP3Q5T1R4 2406 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 FXYD6-FXYD2A0A087WZ82 144 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 VSTM5A8MXK1 200 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 IGHV1-46P01743 117 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 ADH4P08319 380 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 RNF224P0DH78 156 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 TNFSF4P23510 183 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 GNRHRP30968 328 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 PAX5Q02548 391 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 ATXN7L3Q14CW9 347 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-205ENST00000556096 HMGN3Q15651 99 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 ADIPOQQ15848 244 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 ZNF767PQ75MW2 155 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 H1FOOQ8IZA3 346 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-205ENST00000556096 GCSAMQ8N6F7 178 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 LRTM2Q8N967 370 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 OR10J5Q8NHC4 309 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 LILRB1Q8NHL6 650 aaPredicted RBP12.36□□□□□ -0.43
VPS33B-205ENST00000556096 PPP1R1CQ8WVI7 109 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 FLNCQ14315 2725 aa12.36□□□□□ -0.43
VPS33B-205ENST00000556096 UBR5O95071 2799 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 ADAP1O75689 374 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 RPA2P15927 270 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 EGR1P18146 543 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 SSTR2P30874 369 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 PRDX2P32119 198 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 TNFAIP6P98066 277 aaPredicted RBP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 COL10A1Q03692 680 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 TMEM187Q14656 261 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 C4orf17Q53FE4 359 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 PHLDA2Q53GA4 152 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 NCMAPQ5T1S8 102 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 MOGAT3Q86VF5 341 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 LDLRAD3Q86YD5 345 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 RNASE6Q93091 150 aaKnown RBP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 METTL8Q9H825 291 aaKnown RBP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 PRR13Q9NZ81 148 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 COQ3Q9NZJ6 369 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
VPS33B-205ENST00000556096 DIDO1Q9BTC0 2240 aaKnown RBP12.35□□□□□ -0.43
VPS33B-205ENST00000556096 GPR31O00270 319 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 MPPED1O15442 326 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 ZG16O60844 167 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 TSC22D2O75157 780 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 PSG2P11465 335 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 OR3A1P47881 315 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 OPCMLQ14982 345 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 SPRNQ5BIV9 151 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 CD177Q8N6Q3 437 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 LILRB4Q8NHJ6 448 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 Q8TCH9 128 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 KIRREL1Q96J84 757 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 C2orf50Q96LR7 162 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 SLC5A7Q9GZV3 580 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
VPS33B-205ENST00000556096 KCNIP1Q9NZI2 227 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 OR2W1Q9Y3N9 320 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 FAM90A27PA6NNH2 459 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 M0R233 179 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 ARPC5O15511 151 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 CD55P08174 381 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 OR4A8P0C604 315 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 PSMB6P28072 239 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 HOXA4Q00056 320 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-205ENST00000556096 CDSNQ15517 529 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 LIAT1Q6ZQX7 453 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 OR11L1Q8NGX0 322 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 FAM222BQ8WU58 562 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 SHARPINQ9H0F6 387 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 TAF9BQ9HBM6 251 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 GCM1Q9NP62 436 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 RNF7Q9UBF6 113 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 DNAJB11Q9UBS4 358 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 NDRG3Q9UGV2 375 aa12.34□□□□□ -0.43
VPS33B-205ENST00000556096 CADP27708 2225 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 IGKV1D-17A0A075B6S4 117 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 TRAV39A0A0B4J263 110 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 OOEPA6NGQ2 149 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 MPC2O95563 127 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 IFNA21P01568 189 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 HEXAP06865 529 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 HOXB5P09067 269 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 S100A11P31949 105 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 IL15RAQ13261 267 aa12.33□□□□□ -0.44
VPS33B-205ENST00000556096 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms