RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 KIR2DS4P43632 304 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 PAX8Q06710 450 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 KIR2DS1Q14954 304 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 TRAPPC6BQ86SZ2 158 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 OR10A7Q8NGE5 316 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 OR13A1Q8NGR1 328 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 MRGPRDQ8TDS7 321 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 GPX8Q8TED1 209 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 NUDCD2Q8WVJ2 157 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 FCAMRQ8WWV6 532 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 CYYR1Q96J86 154 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF714Q96N38 554 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 HDHD3Q9BSH5 251 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-221ENST00000555773 ST6GALNAC5Q9BVH7 336 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 MMP26Q9NRE1 261 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 HIF1ANQ9NWT6 349 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 KPTNQ9Y664 436 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 V9GYH0 126 aa10.27□□□□□ -0.77
SHMT2-221ENST00000555773 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 CSPG4Q6UVK1 2322 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 TRDCB7Z8K6 153 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 NPIPB11E5RHQ5 1161 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 GABARAPH6UMI1 98 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 J3QLI3 93 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 SPINT2O43291 252 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 GSTZ1O43708 216 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-221ENST00000555773 RBBP9O75884 186 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 PTHLHP12272 177 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 RCC1P18754 421 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-221ENST00000555773 GLP1RP43220 463 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 DLX6P56179 175 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 ARF6P62330 175 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 SSBP1Q04837 148 aaKnown RBP10.26□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF273Q14593 569 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 TMEM30BQ3MIR4 351 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 DCAF12L2Q5VW00 463 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 HEPN1Q6WQI6 88 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 TCF23Q7RTU1 214 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 HOGA1Q86XE5 327 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 SETD6Q8TBK2 473 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 ARL11Q969Q4 196 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 TAF9BQ9HBM6 251 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 CALYQ9NYX4 217 aa10.26□□□□□ -0.77
SHMT2-221ENST00000555773 TRAV39A0A0B4J263 110 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 MEIOCA2RUB1 952 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 C12orf77C9JDV5 145 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 DIRAS3O95661 229 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 INHBBP09529 407 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 CTXN2P0C2S0 81 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 CD99P14209 185 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 NAT1P18440 290 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 PRTN3P24158 256 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 MADCAM1Q13477 382 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 HMGN3Q15651 99 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 PYDC2Q56P42 97 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 METTL11BQ5VVY1 283 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 C11orf42Q8N5U0 333 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 GDPD1Q8N9F7 314 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 OR4A4PQ8NGN8 299 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 SMIM4Q8WVI0 70 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 GALMQ96C23 342 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 METTL8Q9H825 291 aaKnown RBP10.25□□□□□ -0.77
SHMT2-221ENST00000555773 UNKLQ9H9P5 680 aaKnown RBP10.25□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF286AQ9HBT8 521 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 AKIP1Q9NQ31 210 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 IFT46Q9NQC8 304 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 ONECUT1Q9UBC0 465 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 MTFP1Q9UDX5 166 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 ZNF230Q9UIE0 474 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-221ENST00000555773 ANAPC10Q9UM13 185 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 VPS13CQ709C8 3753 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
SHMT2-221ENST00000555773 OTOGQ6ZRI0 2925 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 F2RL2O00254 374 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 CD5LO43866 347 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 CCL3L1P16619 93 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 FPR2P25090 351 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 RCVRNP35243 200 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 ACTBP60709 375 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 ACTG1P63261 375 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 HTD2P86397 168 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 LSAMPQ13449 338 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 OR52W1Q6IF63 320 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 FAHD2BQ6P2I3 314 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-221ENST00000555773 Q6ZPA2 131 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 Q8N402 240 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 MFSD4AQ8N468 514 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 BEST4Q8NFU0 473 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 OR52M1Q8NGK5 317 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 OR52I2Q8NH67 350 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 RFESDQ8TAC1 157 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 FAHD2AQ96GK7 314 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 THAP7Q9BT49 309 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-221ENST00000555773 C7orf69Q9H7B7 122 aa10.24□□□□□ -0.77
SHMT2-221ENST00000555773 TAS2R8Q9NYW2 309 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms