RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ENKURQ8TC29 256 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 MRGPRDQ8TDS7 321 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 RAB1CQ92928 201 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 PERPQ96FX8 193 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 TMPRSS13Q9BYE2 586 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 SLC25A10Q9UBX3 287 aaPredicted RBP8.48□□□□□ -1.05
SRP54-208ENST00000555557 ZNF107Q9UII5 783 aaPredicted RBP8.48□□□□□ -1.05
SRP54-208ENST00000555557 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
SRP54-208ENST00000555557 TRBV6-6A0A0A6YYG2 114 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 CEACAM18A8MTB9 384 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 TRDCB7Z8K6 153 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 DVL1O14640 695 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 CRYZL1O95825 349 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 FAUP35544 74 aaKnown RBP8.47□□□□□ -1.05
SRP54-208ENST00000555557 KCNJ3P48549 501 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 ATP5J2P56134 94 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 SEC61A1P61619 476 aaKnown RBP8.47□□□□□ -1.05
SRP54-208ENST00000555557 PLA1AQ53H76 456 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 OVCH2Q7RTZ1 564 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 OR5D13Q8NGL4 314 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 OR13A1Q8NGR1 328 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 TIMD4Q96H15 378 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 C7orf50Q9BRJ6 194 aaKnown RBP8.47□□□□□ -1.05
SRP54-208ENST00000555557 EHFQ9NZC4 300 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 ARID1AO14497 2285 aa8.47□□□□□ -1.05
SRP54-208ENST00000555557 IGKV1-6A0A0C4DH72 117 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 LOC105371267A0A1B0GV96 52 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 ODAMA1E959 279 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 H7C1Q1 480 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 BET1O15155 118 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 FABP7O15540 132 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 NDUFB3O43676 98 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 CCNKO75909 580 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 IFNA6P05013 189 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 SSTR2P30874 369 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 GLP1RP43220 463 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 GPR6P46095 362 aaPredicted RBP8.46□□□□□ -1.05
SRP54-208ENST00000555557 NKX2-5P52952 324 aaPredicted RBP8.46□□□□□ -1.05
SRP54-208ENST00000555557 P2RX3P56373 397 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 RAB25P57735 213 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 TAS2R46P59540 309 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 TSPAN5P62079 268 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 HERPUD1Q15011 391 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 CDK10Q15131 360 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 RFESDQ8TAC1 157 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 IL1F10Q8WWZ1 152 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 KIRREL1Q96J84 757 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 FAM234AQ9H0X4 552 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 DNTTIP1Q9H147 329 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 TAF9BQ9HBM6 251 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 MBNL3Q9NUK0 354 aaKnown RBP8.46□□□□□ -1.05
SRP54-208ENST00000555557 KAAG1Q9UBP8 84 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 ZNF221Q9UK13 617 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 FLVCR2Q9UPI3 526 aa8.46□□□□□ -1.05
SRP54-208ENST00000555557 TRAV6A0A075B6T7 132 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 NAP1L6A6NFF2 107 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 NDUFA2O43678 99 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 TCRBP04435 133 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 OR5H8P0DN80 308 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 RPS2P15880 293 aaKnown RBP8.46□□□□□ -1.06
SRP54-208ENST00000555557 SSTR5P35346 364 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 HLA-DRB3P79483 266 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 MEF2DQ14814 521 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 SRSF7Q16629 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
SRP54-208ENST00000555557 LRRC10Q5BKY1 277 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 FAM53AQ6NSI3 398 aaPredicted RBP8.46□□□□□ -1.06
SRP54-208ENST00000555557 IDO2Q6ZQW0 420 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 Q6ZS49 121 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 DUSP18Q8NEJ0 188 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 OR1L1Q8NH94 360 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 GRPEL2Q8TAA5 225 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 H1FXQ92522 213 aaKnown RBP8.46□□□□□ -1.06
SRP54-208ENST00000555557 UPRTQ96BW1 309 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 BPESC1Q9GZL8 116 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 DPAGT1Q9H3H5 408 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 C19orf12Q9NSK7 152 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 POLQO75417 2590 aa8.46□□□□□ -1.06
SRP54-208ENST00000555557 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 KIR2DS1A0A191URI9 304 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 DISC1C4P0D8 188 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 C12orf77C9JDV5 145 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 FSTL3O95633 263 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 TBPP20226 339 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 M6PRP20645 277 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 NFYAP23511 347 aaPredicted RBP8.45□□□□□ -1.06
SRP54-208ENST00000555557 KIR2DS4P43632 304 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 PAX5Q02548 391 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 KIR2DS1Q14954 304 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 ACTBL2Q562R1 376 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 ZNF841Q6ZN19 808 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 TCF23Q7RTU1 214 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 MUC20Q8N307 709 aaPredicted RBP8.45□□□□□ -1.06
SRP54-208ENST00000555557 OR13C8Q8NGS7 320 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 DEDD2Q8WXF8 326 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 MRGPRFQ96AM1 343 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 GINS4Q9BRT9 223 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 SLA2Q9H6Q3 261 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 NUDT15Q9NV35 164 aa8.45□□□□□ -1.06
SRP54-208ENST00000555557 NECAP2Q9NVZ3 263 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms