RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TWIST2Q8WVJ9 160 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 ITLN2Q8WWU7 325 aaPredicted RBP2.95□□□□□ -1.94
VRK1-205ENST00000555402 SMIM19Q96E16 107 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 PEBP4Q96S96 227 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 PITX2Q99697 317 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 TMEM208Q9BTX3 173 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 SLC25A31Q9H0C2 315 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 OR51B6Q9H340 312 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 MFSD1Q9H3U5 465 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 TMEM38BQ9NVV0 291 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 TAS2R13Q9NYV9 303 aa2.95□□□□□ -1.94
VRK1-205ENST00000555402 EVC2Q86UK5 1308 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 NRCAMQ92823 1304 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 SCN4AP35499 1836 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 CD300LBA8K4G0 201 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 F5H5T6 163 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 TGOLN2O43493 480 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 SYNGR1O43759 233 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 ASS1P00966 412 aaKnown RBP2.94□□□□□ -1.94
VRK1-205ENST00000555402 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 SLC2A1P11166 492 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 M6PRP20645 277 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 GRPRP30550 384 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 GTF2H1P32780 548 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 GCLMP48507 274 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 CXCR4P61073 352 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 TSPAN31Q12999 210 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 TMED2Q15363 201 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 TBC1D28Q2M2D7 210 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 CEACAM21Q3KPI0 293 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 LPCAT4Q643R3 524 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 ZNF680Q8NEM1 530 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 OR1P1Q8NH06 330 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 SCGB1C1Q8TD33 95 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 OPTNQ96CV9 577 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 MRAP2Q96G30 205 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 PACRGQ96M98 296 aaPredicted RBP2.94□□□□□ -1.94
VRK1-205ENST00000555402 KCTD7Q96MP8 289 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 RBP7Q96R05 134 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 BCL2L14Q9BZR8 327 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 SLC19A3Q9BZV2 496 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 POMKQ9H5K3 350 aa2.94□□□□□ -1.94
VRK1-205ENST00000555402 SPANXB1Q9NS25 103 aaPredicted RBP2.94□□□□□ -1.94
VRK1-205ENST00000555402 SAMHD1Q9Y3Z3 626 aaKnown RBP2.94□□□□□ -1.94
VRK1-205ENST00000555402 C9orf84Q5VXU9 1444 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 SNAPC4Q5SXM2 1469 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 RPRD2Q5VT52 1461 aaKnown RBP2.93□□□□□ -1.94
VRK1-205ENST00000555402 IGKV1D-17A0A075B6S4 117 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.93□□□□□ -1.94
VRK1-205ENST00000555402 H3BP45 60 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 CCRL2O00421 344 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 CXCR6O00574 342 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 PFDN6O15212 129 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 SSNA1O43805 119 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 IGKV1-17P01599 117 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 IGKV5-2P06315 115 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 C8orf88P0DMB2 117 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 PSMB9P28065 219 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 CAPZBP47756 277 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 PSMD7P51665 324 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 ERVS71-1P61550 626 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 LSM6P62312 80 aaKnown RBP2.93□□□□□ -1.94
VRK1-205ENST00000555402 TMEM241Q24JQ0 296 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 LINC00303Q3SY05 128 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 DNM1P34Q6PK57 102 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 NT5DC3Q86UY8 548 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 SLC13A5Q86YT5 568 aaPredicted RBP2.93□□□□□ -1.94
VRK1-205ENST00000555402 TRAPPC5Q8IUR0 188 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 PIGXQ8TBF5 258 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 STACQ99469 402 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 ULBP1Q9BZM6 244 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 CENPHQ9H3R5 247 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 FKBP14Q9NWM8 211 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 COMMD9Q9P000 198 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 RBM12B-AS1Q9P1G2 102 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 ADGRL3Q9HAR2 1447 aa2.93□□□□□ -1.94
VRK1-205ENST00000555402 ABCC11Q96J66 1382 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 KIAA1671Q9BY89 1806 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 TINCRA0A1B0GVN0 87 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 A0A1B0GXF2 115 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 ACOX3O15254 700 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 GYG2O15488 501 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 UGT2B11O75310 529 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 KCNK2O95069 426 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 TCRBP04435 133 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 TYMSP04818 313 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 PFN1P07737 140 aaKnown RBP2.92□□□□□ -1.94
VRK1-205ENST00000555402 SOD3P08294 240 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 CECR9P0C854 216 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 PRPS1L1P21108 318 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 LGALS7P47929 136 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 GNG10P50151 68 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 ARF6P62330 175 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 HBG1P69891 147 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 HBG2P69892 147 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 AESQ08117 197 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 FAM53BQ14153 422 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 SPIN4Q56A73 249 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 SPOPLQ6IQ16 392 aa2.92□□□□□ -1.94
VRK1-205ENST00000555402 CD200R1LQ6Q8B3 271 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms