RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 IGHV3-11P01762 117 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 HLA-DRB1P01911 266 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 ATF1P18846 271 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 IL3RAP26951 378 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 BLVRBP30043 206 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-215ENST00000555259 CHRNA7P36544 502 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 VHLP40337 213 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 PAN3Q58A45 887 aaKnown RBP7.34□□□□□ -1.23
SCFD1-215ENST00000555259 C19orf54Q5BKX5 351 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 RSBN1Q5VWQ0 802 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-215ENST00000555259 TMEM236Q5W0B7 351 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 CYP2R1Q6VVX0 501 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 SLC35F2Q8IXU6 374 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 C8orf31Q8N9H6 132 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 SPSB1Q96BD6 273 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 CMTM5Q96DZ9 223 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 LRGUKQ96M69 825 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 OPALINQ96PE5 141 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 ADI1Q9BV57 179 aa7.34□□□□□ -1.23
SCFD1-215ENST00000555259 DNAH2Q9P225 4427 aa7.34□□□□□ -1.24
SCFD1-215ENST00000555259 TRAV24A0A0B4J272 114 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 LOC107986453A0A1B0GWG9 222 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 CXorf65A6NEN9 183 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ARPC1BO15143 372 aaKnown RBP7.33□□□□□ -1.24
SCFD1-215ENST00000555259 TXNL1O43396 289 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 OSMP13725 252 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 PAX5Q02548 391 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 RAB40BQ12829 278 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 PMS2P11Q13670 270 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ECSCRQ19T08 205 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 UTS2BQ765I0 119 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 PLPPR1Q8TBJ4 325 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 GIPC3Q8TF64 312 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 TMEM106AQ96A25 262 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 SPACA5Q96QH8 159 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 PLEKHA3Q9HB20 300 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 SLC25A19Q9HC21 320 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 FAM53CQ9NYF3 392 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 FOXA2Q9Y261 457 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-215ENST00000555259 NUPR2A6NF83 97 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF670-ZNF695F2Z2N8 137 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 SDCBPO00560 298 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-215ENST00000555259 APOL3O95236 402 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 KRT8P05787 483 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ATP6V1B2P21281 511 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF137PP52743 207 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 NDPQ00604 133 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 IL34Q6ZMJ4 242 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 SSX6Q7RTT6 188 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 SAXO1Q8IYX7 474 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 RDH10Q8IZV5 341 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 OR52M1Q8NGK5 317 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ANKRD60Q9BZ19 345 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 MAGIXQ9H6Y5 334 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 ADGRL4Q9HBW9 690 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 NEK6Q9HC98 313 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 FAM118AQ9NWS6 357 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 CLN6Q9NWW5 311 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 TVP23BQ9NYZ1 205 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 MYRFQ9Y2G1 1151 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 FBXO7Q9Y3I1 522 aa7.33□□□□□ -1.24
SCFD1-215ENST00000555259 DNAH6Q9C0G6 4158 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 SLC31A2O15432 143 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 OCM2P0CE71 109 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 OCMP0CE72 109 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-215ENST00000555259 UBCP0CG48 685 aaKnown RBP7.32□□□□□ -1.24
SCFD1-215ENST00000555259 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
SCFD1-215ENST00000555259 GZMHP20718 246 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 ACTBP60709 375 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 LSAMPQ13449 338 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 LCN12Q6JVE5 192 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 FAHD1Q6P587 224 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 SLC25A48Q6ZT89 311 aaKnown RBP7.32□□□□□ -1.24
SCFD1-215ENST00000555259 PRSS35Q8N3Z0 413 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 OR9G4Q8NGQ1 327 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 UBALD1Q8TB05 177 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 CNIH3Q8TBE1 160 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 FGGYQ96C11 551 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 RITA1Q96K30 269 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 RHOVQ96L33 236 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 NR1H4Q96RI1 486 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-215ENST00000555259 TEX12Q9BXU0 123 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 GFOD1Q9NXC2 390 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 ERGIC3Q9Y282 383 aa7.32□□□□□ -1.24
SCFD1-215ENST00000555259 IGHV3-43A0A0B4J1X8 118 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 TCRBV5S2A0A599 114 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 C15orf65H3BRN8 121 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 CNIH1O95406 144 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 IGHV3-43DP0DP04 118 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 KCNJ3P48549 501 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 CRIP2P52943 208 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-215ENST00000555259 GK3PQ14409 553 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 LRRC36Q1X8D7 754 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 C5orf64Q2M2E5 130 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 PYHIN1Q6K0P9 492 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 LIN54Q6MZP7 749 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 CEMP1Q6PRD7 247 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-215ENST00000555259 BCDIN3DQ7Z5W3 292 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms