RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 IGFL3Q6UXB1 125 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 FAM169BQ8N8A8 192 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 OR8G5Q8NG78 346 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 BCL2L14Q9BZR8 327 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 MS4A7Q9GZW8 240 aaPredicted RBP18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 HES4Q9HCC6 221 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 MBNL3Q9NUK0 354 aaKnown RBP18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 COQ3Q9NZJ6 369 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 WIPI2Q9Y4P8 454 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 DOCK7Q96N67 2140 aa18.03■□□□□ 0.48
ARHGEF40-204ENST00000555038 FAM186AA6NE01 2351 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 CACNA1GO43497 2377 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 SLC25A6P12236 298 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 ERVS71-1P61550 626 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 DEFA5Q01523 94 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 ZNF273Q14593 569 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 P2RY6Q15077 328 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 SVBPQ8N300 66 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 OR10V1Q8NGI7 309 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 LILRB1Q8NHL6 650 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 PURGQ9UJV8 347 aaKnown RBP18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 ZDHHC8Q9ULC8 765 aa18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 CARHSP1Q9Y2V2 147 aaKnown RBP18.02■□□□□ 0.48
ARHGEF40-204ENST00000555038 PTPRBP23467 1997 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 ABCD4O14678 606 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 CDIPTO14735 213 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 IGLV1-44P01699 117 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 KITLGP21583 273 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 RAB5CP51148 216 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 SWI5Q1ZZU3 235 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 BTNL8Q6UX41 500 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 OR2C3Q8N628 320 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 LYPD6BQ8NI32 183 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 SMIM3Q9BZL3 60 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 SLC25A31Q9H0C2 315 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 CXXC4Q9H2H0 198 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 TAAR3PQ9P1P4 343 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 PROCRQ9UNN8 238 aa18.02■□□□□ 0.47
ARHGEF40-204ENST00000555038 WDR1O75083 606 aa18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 LPAR6P43657 344 aa18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 RTP5Q14D33 572 aa18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 C5orf24Q7Z6I8 188 aa18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 COMMD1Q8N668 190 aa18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 BOLLQ8N9W6 283 aaKnown RBP18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 NKX6-2Q9C056 277 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-204ENST00000555038 LOC105371267A0A1B0GV96 52 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 MBD3L4A6NDZ8 208 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 MBD3L3A6NE82 208 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 MBD3L5A6NJ08 208 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 SIRPB1O00241 398 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 ADAM20O43506 726 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 FBXO24O75426 580 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 SPP1P10451 314 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 CEACAM1P13688 526 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 LMO1P25800 156 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 EWSR1Q01844 656 aaKnown RBP eCLIP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 ID3Q02535 119 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 HMGN3Q15651 99 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 EIF2S3LQ2VIR3 472 aaKnown RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 ALKBH6Q3KRA9 238 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 MBD3L2Q8NHZ7 208 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 PLPPR1Q8TBJ4 325 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 TSNAXQ99598 290 aaKnown RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 SEC11CQ9BY50 192 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 TLNRD1Q9H1K6 362 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 HRH4Q9H3N8 390 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 PLEKHF2Q9H8W4 249 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 ERRFI1Q9UJM3 462 aaPredicted RBP18■□□□□ 0.47
ARHGEF40-204ENST00000555038 TRAPPC2LQ9UL33 140 aa18■□□□□ 0.47
ARHGEF40-204ENST00000555038 C1QTNF9BB2RNN3 333 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 MPV17P39210 176 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 ZNF266Q14584 549 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 ESPL1Q14674 2120 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 LYRM2Q9NU23 88 aaPredicted RBP17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 STRAPQ9Y3F4 350 aaKnown RBP17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 TNFSF13O75888 250 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 BAXQ07812 192 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 MZT1Q08AG7 82 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 WFDC1Q9HC57 220 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 TREM1Q9NP99 234 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 ZNF71Q9NQZ8 489 aaPredicted RBP17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 UQCC1Q9NVA1 299 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 DKK4Q9UBT3 224 aa17.99■□□□□ 0.47
ARHGEF40-204ENST00000555038 A0A1B0GU03 582 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 PITX3O75364 302 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 HAND1O96004 215 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 CGAP01215 116 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 CECR9P0C854 216 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 DANCRP0C864 163 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 NOVA1P51513 510 aaKnown RBP17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 VAMP2P63027 116 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 ZNF718Q3SXZ3 478 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 MBNL2Q5VZF2 373 aaKnown RBP17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 ATRAIDQ6UW56 229 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 Q6ZRG5 221 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 BEND4Q6ZU67 534 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 PRR7Q8TB68 274 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 TAAR6Q96RI8 345 aa17.98■□□□□ 0.47
ARHGEF40-204ENST00000555038 LUZP4Q9P127 313 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms