RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 KCTD9Q7L273 389 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 EIF4E3Q8N5X7 224 aaKnown RBP9.42□□□□□ -0.9
SHMT2-216ENST00000554975 OR5L1Q8NGL2 311 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 OR10K1Q8NGX5 313 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 OR13G1Q8NGZ3 307 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 STOML3Q8TAV4 291 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 C10orf105Q8TEF2 133 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 MSI2Q96DH6 328 aaKnown RBP9.42□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-216ENST00000554975 C2orf50Q96LR7 162 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 USB1Q9BQ65 265 aaKnown RBP9.42□□□□□ -0.9
SHMT2-216ENST00000554975 SYT3Q9BQG1 590 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 ST6GALNAC5Q9BVH7 336 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF471Q9BX82 626 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-216ENST00000554975 SUCNR1Q9BXA5 334 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 RHOFQ9HBH0 211 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 SLC7A10Q9NS82 523 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 DECR2Q9NUI1 292 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 SDHAF2Q9NX18 166 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 MBD2Q9UBB5 411 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 KCNS2Q9ULS6 477 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
SHMT2-216ENST00000554975 TEX13DA0A0J9YY54 714 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 C5orf63A6NC05 138 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 CCSO14618 274 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 TAAR5O14804 337 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 SPDEFO95238 335 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 CRYZL1O95825 349 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 CST4P01036 141 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 FCGR3AP08637 254 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 LYL1P12980 280 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 NTF4P34130 210 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 APLNRP35414 380 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 HERV-K104P61576 105 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF92Q03936 586 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 HGFACQ04756 655 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 ABCA11PQ4W5N1 156 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 PDLIM3Q53GG5 364 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF660Q6AZW8 331 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 ELP2Q6IA86 826 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 PRSS54Q6PEW0 395 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 MOB3CQ70IA8 216 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 MKXQ8IYA7 352 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 ADAD2Q8NCV1 583 aaKnown RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 Q8NFD4 153 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 DCUN1D4Q92564 292 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 FAM168AQ92567 244 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 TMEM230Q96A57 120 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 HIST1H2AAQ96QV6 131 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 PAPOLGQ9BWT3 736 aaKnown RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 RIMS4Q9H426 269 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 GLS2Q9UI32 602 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 FBXO9Q9UK97 447 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-216ENST00000554975 MPC1Q9Y5U8 109 aa9.41□□□□□ -0.9
SHMT2-216ENST00000554975 KIR2DS1A0A191URI9 304 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 A0A1W2PR80 420 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 RNF222A6NCQ9 220 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 OR5H1A6NKK0 313 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 F5H0A9 414 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-216ENST00000554975 TCF21O43680 179 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 GLAP06280 429 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF728P0DKX0 622 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 OR5H8P0DN80 308 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 COX5AP20674 150 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 FUT3P21217 361 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 USF1P22415 310 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-216ENST00000554975 ANOS1P23352 680 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 KIR2DS4P43632 304 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 FOXG1P55316 489 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-216ENST00000554975 UCP3P55916 312 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 DSCR9P59020 149 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 FGF12P61328 243 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 TGFBR3Q03167 851 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 KIR2DS1Q14954 304 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 LRRC37A5PQ49AS3 106 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 TIMM23BQ5SRD1 257 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 AADACL3Q5VUY0 350 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 C6orf201Q7Z4U5 140 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 C1QL2Q7Z5L3 287 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 SLC38A6Q8IZM9 456 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 OR56B2PQ8NGI1 322 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 SUN5Q8TC36 379 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 PIGCQ92535 297 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 AQP10Q96PS8 301 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 ZNF2Q9BSG1 426 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-216ENST00000554975 METTL8Q9H825 291 aaKnown RBP9.4□□□□□ -0.9
SHMT2-216ENST00000554975 FN3KRPQ9HA64 309 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 RASL12Q9NYN1 266 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 ST3GAL6Q9Y274 331 aa9.4□□□□□ -0.9
SHMT2-216ENST00000554975 C13orf42A0A1B0GVH6 325 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 PQLC2LA1A4F0 135 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 MFSD2BA6NFX1 497 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 CRYM-AS1A6NIL9 109 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 ANKRD30BLA7E2S9 258 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 ZNF850A8MQ14 1090 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 E7EQL1 145 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 TEX46H3BTG2 121 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 VENTXO95231 258 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms