RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ABHD12Q8N2K0 398 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 BEND2Q8NDZ0 799 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 OR4P4Q8NGL7 312 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 PIFOQ8TCI5 191 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 FAM3DQ96BQ1 224 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 CENPOQ9BU64 300 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 TM2D1Q9BX74 207 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 CST11Q9H112 138 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 GAL3ST2Q9H3Q3 398 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 NCOR1P1Q9H4R4 102 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 ETAA1Q9NY74 926 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 OR6C3Q9NZP0 311 aa10□□□□□ -0.81
SYNE2-214ENST00000554928 LOC100506127A0A0U1RQW1 187 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM89A2RUT3 159 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A10PA6NDY2 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A18PA6NE21 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A16PA6NEW6 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A20PA6NIJ5 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A7PA6NKC0 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A22PA8MWA6 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A12PA8MX19 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A5PA8MXJ8 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A23PA8MXZ1 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 MCRIP1C9JLW8 97 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 AIPO00170 330 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 GPR137BO60478 399 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 PAHP00439 452 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A15PP0C7V4 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A13PP0C7W8 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A14PP0C7W9 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAM90A24PP0C7X0 464 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 ARSBP15848 533 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 RCC1P18754 421 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-214ENST00000554928 RAB3BP20337 219 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FUT3P21217 361 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 GALP22466 123 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 MYL9P24844 172 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 RAB13P51153 203 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM50BP56557 158 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 LY6EQ16553 131 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FBLN7Q53RD9 439 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 C16orf87Q6PH81 154 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 GAPTQ8N292 157 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 KCNG3Q8TAE7 436 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 MRPL30Q8TCC3 161 aaKnown RBP9.99□□□□□ -0.81
SYNE2-214ENST00000554928 SSMEM1Q8WWF3 244 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 HDHD3Q9BSH5 251 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-214ENST00000554928 FAAP24Q9BTP7 215 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 MEGF9Q9H1U4 602 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 LINC00574Q9H8X3 128 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 STEAP1Q9UHE8 339 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 STAB1Q9NY15 2570 aa9.99□□□□□ -0.81
SYNE2-214ENST00000554928 A0A087WXM4 84 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 A0A087X0M5 115 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 IGHV3-43A0A0B4J1X8 118 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 A0A1B0GX30 115 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 A0A1W2PPE3 182 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 IFITM5A6NNB3 132 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 C12orf77C9JDV5 145 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 H3BUX3 64 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 IGLV1-47P01700 117 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 IGHV3-43DP0DP04 118 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 HKR1P10072 659 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 CD34P28906 385 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 BLVRBP30043 206 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-214ENST00000554928 SDC2P34741 201 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 LGALS4P56470 323 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 MXD1Q05195 221 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 SSX2Q16385 188 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 MOGAT2Q3SYC2 334 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 OLFML2AQ68BL7 652 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 OR2W3Q7Z3T1 314 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 FAM89BQ8N5H3 189 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 TMEM86BQ8N661 226 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 OR1L1Q8NH94 360 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 SPATA3Q8NHX4 192 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 GCDHQ92947 438 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-214ENST00000554928 YIPF6Q96EC8 236 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 SSX3Q99909 188 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 SPACA1Q9HBV2 294 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 SSR3Q9UNL2 185 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 HILPDAQ9Y5L2 63 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 POMT1Q9Y6A1 747 aa9.98□□□□□ -0.81
SYNE2-214ENST00000554928 PDCD5O14737 125 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 CFPP27918 469 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 VEGFCP49767 419 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 GNG10P50151 68 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 DIAPH2-AS1Q14236 149 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 FAM189A2Q15884 450 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 LRRC75BQ2VPJ9 315 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 PLAC9Q5JTB6 97 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 CCBE1Q6UXH8 406 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-214ENST00000554928 ZNF565Q8N9K5 539 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 ARL11Q969Q4 196 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 RBMXL1Q96E39 390 aaKnown RBP9.97□□□□□ -0.81
SYNE2-214ENST00000554928 ZMAT3Q9HA38 289 aaKnown RBP9.97□□□□□ -0.81
SYNE2-214ENST00000554928 LIN7BQ9HAP6 207 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms