RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MAP3K19Q56UN5 1328 aa1.56□□□□□ -2.16
SCFD1-213ENST00000554776 POLR3AO14802 1390 aaPredicted RBP1.56□□□□□ -2.16
SCFD1-213ENST00000554776 GGTLC3B5MD39 225 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 F8VZ95 297 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 GOLGA8RI6L899 631 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 CALUO43852 315 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 GPR75O95800 540 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 PDYNP01213 254 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 IGLV6-57P01721 117 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 IGHV3-53P01767 116 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 HLA-AP01891 365 aaKnown RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 PET100P0DJ07 73 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 COL8A2P25067 703 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 RAB8AP61006 207 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 SKP2Q13309 424 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 IHHQ14623 411 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 AMMECR1LQ6DCA0 310 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 NIPAL1Q6NVV3 410 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 BRD3OSQ6XYD6 125 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 FUNDC1Q8IVP5 155 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 C2orf73Q8N5S3 287 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 OTUD6BQ8N6M0 293 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 FER1L6-AS1Q8NA97 138 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 ACBD4Q8NC06 268 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 OR5D18Q8NGL1 313 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 OR5AK3PQ8NH89 298 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 SPPL2BQ8TCT7 592 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 KCTD4Q8WVF5 259 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 TVP23CQ96ET8 276 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF514Q96K75 400 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 GPR22Q99680 433 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF251Q9BRH9 671 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 C7orf50Q9BRJ6 194 aaKnown RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 ALX4Q9H161 411 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 COMMD9Q9P000 198 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF443Q9Y2A4 671 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 PHLDA3Q9Y5J5 127 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 OR51B4Q9Y5P0 310 aa1.55□□□□□ -2.16
SCFD1-213ENST00000554776 YLPM1P49750 1951 aaKnown RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 USP42Q9H9J4 1324 aaKnown RBP1.55□□□□□ -2.16
SCFD1-213ENST00000554776 IGKV1D-37A0A075B6S9 117 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 IGKV1-12A0A0C4DH73 117 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 B4DEV8 164 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 TMEM250H0YL14 139 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 K7EQS6 105 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 IGKV1D-12P01611 117 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 GYPCP04921 128 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 IGKV4-1P06312 121 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 GUSBP08236 651 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 P0C880 135 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF708P17019 499 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 PSMA1P25786 263 aaKnown RBP1.54□□□□□ -2.16
SCFD1-213ENST00000554776 PSMB6P28072 239 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 GABRA3P34903 492 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 STC1P52823 247 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 DLX6P56179 175 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 CLDN12P56749 244 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 TSPAN31Q12999 210 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 APOFQ13790 326 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 TIMM23BQ5SRD1 257 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 TTC33Q6PID6 262 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-213ENST00000554776 LYPD6Q86Y78 171 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 DOLPP1Q86YN1 238 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 MSRB3Q8IXL7 192 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 CPNE9Q8IYJ1 553 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 ZNF664Q8N3J9 261 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 KRTCAP2Q8N6L1 136 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 OR4P4Q8NGL7 312 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 OR9I1Q8NGQ6 314 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 SUN5Q8TC36 379 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 DNAJB3Q8WWF6 145 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 APOBEC3DQ96AK3 386 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-213ENST00000554776 SLC25A44Q96H78 314 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-213ENST00000554776 TRIB3Q96RU7 358 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 HBEGFQ99075 208 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 B9D2Q9BPU9 175 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 LLPHQ9BRT6 129 aaKnown RBP1.54□□□□□ -2.16
SCFD1-213ENST00000554776 ARL6Q9H0F7 186 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 SLC23A2Q9UGH3 650 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 NID2Q14112 1375 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 PTPRKQ15262 1439 aa1.54□□□□□ -2.16
SCFD1-213ENST00000554776 FABP12A6NFH5 140 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 ZSWIM8A7E2V4 1837 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 EEF1E1O43324 174 aaKnown RBP1.53□□□□□ -2.16
SCFD1-213ENST00000554776 CPSF4O95639 269 aaKnown RBP1.53□□□□□ -2.16
SCFD1-213ENST00000554776 CRATP43155 626 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 NUP153P49790 1475 aaKnown RBP1.53□□□□□ -2.16
SCFD1-213ENST00000554776 GABARAPL2P60520 117 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 EIF4G1Q04637 1599 aaKnown RBP1.53□□□□□ -2.16
SCFD1-213ENST00000554776 DHRS2Q13268 280 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 ZCWPW2Q504Y3 356 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 CENPWQ5EE01 88 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 ZFAND6Q6FIF0 208 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 EBLN2Q6P2I7 272 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 SPNS3Q6ZMD2 512 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 Q6ZQT7 251 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 LRP11Q86VZ4 500 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 RIBC1Q8N443 379 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-213ENST00000554776 LMX1AQ8TE12 382 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms