RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PRTN3P24158 256 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SLC6A1P30531 599 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 REG1BP48304 166 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 CDK9P50750 372 aaKnown RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 RAB5BP61020 215 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 GRB2P62993 217 aaKnown RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 PNOCQ13519 176 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 PAFAH1B3Q15102 231 aaKnown RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 ZNF404Q494X3 552 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 ZNF684Q5T5D7 378 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 N4BP2L1Q5TBK1 243 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SPATA31B1PQ5VZV4 182 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SCGB1D4Q6XE38 83 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 C6orf120Q7Z4R8 191 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 GALNT10Q86SR1 603 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 DRAM1Q8N682 238 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 OR1L8Q8NGR8 309 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SPPL2BQ8TCT7 592 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 GHSRQ92847 366 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 TM4SF18Q96CE8 201 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SIGMAR1Q99720 223 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 EBPLQ9BY08 206 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 SAMD10Q9BYL1 202 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 PLA2G2FQ9BZM2 168 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 NMNAT1Q9HAN9 279 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-211ENST00000554437 INIPQ9NRY2 104 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 DEC1Q9P2X7 70 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 CLUHO75153 1309 aa3.09□□□□□ -1.91
SCFD1-211ENST00000554437 BRCA1P38398 1863 aaKnown RBP3.09□□□□□ -1.92
SCFD1-211ENST00000554437 IGLV4-69A0A075B6H9 119 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 A0A087WUJ7 227 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 PLAC8L1A1L4L8 177 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF878C9JN71 531 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 M0QYV0 167 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 UPK1AO00322 258 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 FFAR1O14842 300 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 SERPINB7O75635 380 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 IFNA21P01568 189 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 REG1AP05451 166 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 OR4A8P0C604 315 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 OR4Q2P0C623 313 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 CRYBA4P53673 196 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 GFERP55789 205 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 HPCAP84074 193 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 EMX1Q04741 257 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-211ENST00000554437 TNFRSF9Q07011 255 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 RSPO1Q2MKA7 263 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-211ENST00000554437 TRMT12Q53H54 448 aaKnown RBP3.08□□□□□ -1.92
SCFD1-211ENST00000554437 CENPWQ5EE01 88 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 UBE2NLQ5JXB2 153 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 TMEM215Q68D42 235 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 FAM71E1Q6IPT2 247 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 OLIG3Q7RTU3 272 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 CAMK2N1Q7Z7J9 78 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 OR2Z1Q8NG97 314 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 OR1J4Q8NGS1 313 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 ABHD3Q8WU67 409 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 YIPF5Q969M3 257 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 CEP170P1Q96L14 293 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 LINC01587Q99440 93 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 PRSS27Q9BQR3 290 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 TRIM4Q9C037 500 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 ZSCAN16Q9H4T2 348 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-211ENST00000554437 UBQLN4Q9NRR5 601 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 DOK5Q9P104 306 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 RBM12B-AS1Q9P1G2 102 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 SMPXQ9UHP9 88 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 VPREB3Q9UKI3 123 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 PRELID3BQ9Y3B1 194 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 CCDC144AA2RUR9 1427 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 COL4A4P53420 1690 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-211ENST00000554437 PBRM1Q86U86 1689 aa3.08□□□□□ -1.92
SCFD1-211ENST00000554437 MYBPHLA2RUH7 354 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 KRBOX1C9JBD0 128 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 D6RAR5 112 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 C15orf65H3BRN8 121 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OR2A4O95047 310 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 CYB5R3P00387 301 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 HBZP02008 142 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 HMGN1P05114 100 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 CD79AP11912 226 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF708P17019 499 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OMGP23515 440 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 DDTP30046 118 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 LINC00315P59091 139 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 DAD1P61803 113 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 TFAMQ00059 246 aaKnown RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 IFITM2Q01629 132 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 MEF2CQ06413 473 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 IHHQ14623 411 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 IRF4Q15306 451 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 BATFQ16520 125 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ACOT6Q3I5F7 207 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ARHGAP11BQ3KRB8 267 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ZCWPW2Q504Y3 356 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 PYCR3Q53H96 274 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms