RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 APOBEC3DQ96AK3 386 aaPredicted RBP12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 ARHGAP21Q5T5U3 1957 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 IGKV1-12A0A0C4DH73 117 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 AP4M1O00189 453 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 AQP7O14520 342 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 SS18L1O75177 396 aaPredicted RBP12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 IGKV1D-12P01611 117 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 CELA3BP08861 270 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 IGHV1-2P23083 117 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 EIF2S3P41091 472 aaKnown RBP12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 FUT6P51993 359 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 CCL20P78556 96 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 FOXF2Q12947 444 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 FAM189A2Q15884 450 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 NSUN5P2Q63ZY6 315 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 LHFPL2Q6ZUX7 228 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 OR5L1Q8NGL2 311 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 TUBA4BQ9H853 241 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
PPP4R3A-201ENST00000554308 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 TMEM187Q14656 261 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 TM2D1Q9BX74 207 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 AK3Q9UIJ7 227 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 MMP24Q9Y5R2 645 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 IFITM10A6NMD0 228 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 E5RGE8 158 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 COX5BP10606 129 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 WNT5AP41221 380 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 P2RY1P47900 373 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 GPM6AP51674 278 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 KCNJ16Q9NPI9 418 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 NSG2Q9Y328 171 aa12.53□□□□□ -0.4
PPP4R3A-201ENST00000554308 GEMIN2O14893 280 aaKnown RBP12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 S100PP25815 95 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 KIR2DL2P43627 348 aaPredicted RBP12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 IDH3GP51553 393 aaPredicted RBP12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 TGFBR3Q03167 851 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 FBXL14Q8N1E6 418 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 ZNF611Q8N823 705 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 TCTEX1D2Q8WW35 142 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 NAA60Q9H7X0 242 aa12.52□□□□□ -0.4
PPP4R3A-201ENST00000554308 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 ATXN7O15265 892 aaPredicted RBP12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 RRP8O43159 456 aaKnown RBP12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 LILRA1O75019 489 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 LMO1P25800 156 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 PMELP40967 661 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 NPBWR2P48146 333 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 CEBPGP53567 150 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 PRDX4Q13162 271 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 C9orf152Q5JTZ5 239 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 Q96M66 194 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 GLRX2Q9NS18 164 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 RELNP78509 3460 aa12.52□□□□□ -0.41
PPP4R3A-201ENST00000554308 GPR137BO60478 399 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 OR2C1O95371 312 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 HAAOP46952 286 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 CLINT1Q14677 625 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 SLAMF9Q96A28 289 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 YPEL4Q96NS1 127 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 SCNM1Q9BWG6 230 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 ST3GAL6Q9Y274 331 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 IGF2RP11717 2491 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 FBP1P09467 338 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 Q6ZT83 130 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 DECR2Q9NUI1 292 aa12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 INTS1Q8N201 2190 aaKnown RBP12.51□□□□□ -0.41
PPP4R3A-201ENST00000554308 CD300LBA8K4G0 201 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 RPS10P46783 165 aaKnown RBP12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 RHEBQ15382 184 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 IGFBP7Q16270 282 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 HAGHQ16775 308 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 ACSF3Q4G176 576 aaPredicted RBP12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 OR2T2Q6IF00 324 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 IGFL3Q6UXB1 125 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 HEPN1Q6WQI6 88 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 FBXW12Q6X9E4 464 aa12.5□□□□□ -0.41
PPP4R3A-201ENST00000554308 C5orf24Q7Z6I8 188 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms