RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 NLKQ9UBE8 527 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 STEAP1Q9UHE8 339 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 ZNF222Q9UK12 451 aa13.5□□□□□ -0.25
NEK9-204ENST00000554258 SMIM31A0A1B0GVY4 71 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 TMEM14DPA8MWL7 114 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 LDLRAD4O15165 306 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 BPNT1O95861 308 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 PSG2P11465 335 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 SERPINB10P48595 397 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 CAV3P56539 151 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 ZNF146Q15072 292 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 RAB11BQ15907 218 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 SMIM21Q3B7S5 101 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 AWAT2Q6E213 333 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 SFXN4Q6P4A7 337 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 SBSPONQ8IVN8 264 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 SLC25A46Q96AG3 418 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 ISOC1Q96CN7 298 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 MRPS24Q96EL2 167 aaKnown RBP13.49□□□□□ -0.25
NEK9-204ENST00000554258 DMRTB1Q96MA1 342 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 KAAG1Q9UBP8 84 aa13.49□□□□□ -0.25
NEK9-204ENST00000554258 IGKV1D-17A0A075B6S4 117 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 IGHV3OR15-7A0A075B7D8 119 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 A0A1B0GW55 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 OR2AT4A6NND4 320 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4L2P0CJ85 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4L3P0CJ86 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4L5P0CJ88 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4L6P0CJ89 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4L7P0CJ90 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 CAPZA1P52907 286 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 MXD1Q05195 221 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 RSU1Q15404 277 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 C2orf76Q3KRA6 126 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4L9Q6RFH8 374 aaPredicted RBP13.48□□□□□ -0.25
NEK9-204ENST00000554258 ZNF788Q6ZQV5 615 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
NEK9-204ENST00000554258 CROCCP3Q8IVE0 287 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 OR10K1Q8NGX5 313 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 PIFOQ8TCI5 191 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 EMG1Q92979 244 aaKnown RBP13.48□□□□□ -0.25
NEK9-204ENST00000554258 FAM3DQ96BQ1 224 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 SDSLQ96GA7 329 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 S100A13Q99584 98 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 FAM192AQ9GZU8 254 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DCSTAMPQ9H295 470 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 PLGRKTQ9HBL7 147 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 DUX4Q9UBX2 424 aa13.48□□□□□ -0.25
NEK9-204ENST00000554258 H3BMQ9 156 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 HTR3BO95264 441 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 SLC2A2P11168 524 aaPredicted RBP13.47□□□□□ -0.25
NEK9-204ENST00000554258 ARSBP15848 533 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 PRDX2P32119 198 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 SCAND1P57086 179 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 IL13RA2Q14627 380 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 SPCS2Q15005 226 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 SLC22A6Q4U2R8 563 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 SPIN3Q5JUX0 258 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 HES5Q5TA89 166 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 Q6ZS46 218 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 OR2W3Q7Z3T1 314 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 BATF2Q8N1L9 274 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 OSR2Q8N2R0 312 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 CD177Q8N6Q3 437 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 TMEM104Q8NE00 496 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 OR51D1Q8NGF3 324 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 KCNG3Q8TAE7 436 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 NDNFQ8TB73 568 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 AJUBAQ96IF1 538 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 BARHL1Q9BZE3 327 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 ZMAT4Q9H898 229 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 IL36RNQ9UBH0 155 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 SORL1Q92673 2214 aa13.47□□□□□ -0.25
NEK9-204ENST00000554258 A0A1W2PP11 408 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 SMIM30A4D0T7 59 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 A6NHS1 94 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 RFPL4AA6NLU0 287 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 RFPL4AL1F8VTS6 287 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 CALCBP10092 127 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 GTF2F2P13984 249 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 PRKACAP17612 351 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 CLDN12P56749 244 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 GMFBP60983 142 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 UNC119Q13432 240 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 P2RY14Q15391 338 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 Q6P435 159 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 ETV3LQ6ZN32 361 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 TMEM219Q86XT9 240 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 OR4X2Q8NGF9 303 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 OR5T2Q8NGG2 359 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 PTX4Q96A99 478 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 CST11Q9H112 138 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 IFT22Q9H7X7 185 aa13.46□□□□□ -0.25
NEK9-204ENST00000554258 METTL8Q9H825 291 aaKnown RBP13.46□□□□□ -0.25
NEK9-204ENST00000554258 ELL3Q9HB65 397 aaPredicted RBP13.46□□□□□ -0.25
NEK9-204ENST00000554258 FAM90A10PA6NDY2 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A18PA6NE21 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A16PA6NEW6 464 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms