RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 NEK7Q8TDX7 302 aa14.52□□□□□ -0.09
SHMT2-206ENST00000553529 CAPSLQ8WWF8 208 aa14.52□□□□□ -0.09
SHMT2-206ENST00000553529 TOMM40LQ969M1 308 aa14.52□□□□□ -0.09
SHMT2-206ENST00000553529 CPNE2Q96FN4 548 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-206ENST00000553529 LRRTM1Q86UE6 522 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 OR1L1Q8NH94 360 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 S100A13Q99584 98 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 SELENOIQ9C0D9 397 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 IFT22Q9H7X7 185 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 LINC00574Q9H8X3 128 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 PITPNC1Q9UKF7 332 aa14.51□□□□□ -0.09
SHMT2-206ENST00000553529 TMEM30CPA0ZSE6 113 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 UBE2QL1A1L167 161 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 MT-ND4P03905 459 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 GTF2F2P13984 249 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 MGMTP16455 207 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 PRRX1P54821 245 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 LOXL3P58215 753 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 MED21Q13503 144 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 C9orf152Q5JTZ5 239 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 ZNF497Q6ZNH5 498 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 Q6ZPA2 131 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 PRR18Q8N4B5 295 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 ZNF565Q8N9K5 539 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 OR10V1Q8NGI7 309 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 ARL11Q969Q4 196 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 TMEM203Q969S6 136 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 RPEQ96AT9 228 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 RBM14Q96PK6 669 aaKnown RBP14.5□□□□□ -0.09
SHMT2-206ENST00000553529 DCLRE1BQ9H816 532 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 RCC2Q9P258 522 aaKnown RBP14.5□□□□□ -0.09
SHMT2-206ENST00000553529 CKLFQ9UBR5 152 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 LINC00527Q9UJ94 153 aa14.5□□□□□ -0.09
SHMT2-206ENST00000553529 ZNF736B4DX44 427 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-206ENST00000553529 C12orf77C9JDV5 145 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 AIPO00170 330 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 SDCBPO00560 298 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-206ENST00000553529 CRTAPO75718 401 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-206ENST00000553529 OR2F2O95006 317 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 RCC1P18754 421 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-206ENST00000553529 MAP2K4P45985 399 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 TAS2R43P59537 309 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 RPS25P62851 125 aaKnown RBP14.49□□□□□ -0.09
SHMT2-206ENST00000553529 PAX5Q02548 391 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 IRF3Q14653 427 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 GNMTQ14749 295 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 ACSM3Q53FZ2 586 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 RAB12Q6IQ22 244 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 GFI1Q99684 422 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 NICN1Q9BSH3 213 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 ERGIC3Q9Y282 383 aa14.49□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A18PA6NE21 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A16PA6NEW6 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A20PA6NIJ5 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 LINC01548A6NM66 108 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A9PA6NNJ1 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A12PA8MX19 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A5PA8MXJ8 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A15PP0C7V4 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A13PP0C7W8 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A14PP0C7W9 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 FAM90A24PP0C7X0 464 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 BRS3P32247 399 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 ZNF134P52741 427 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 MED22Q15528 200 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 MPV17LQ2QL34 196 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 OXLD1Q5BKU9 147 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 SYT6Q5T7P8 510 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-206ENST00000553529 LIPKQ5VXJ0 399 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 UNQ9370/PRO34162Q6UXP9 181 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 OR5AU1Q8NGC0 362 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 Q96M66 194 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 NOL4LQ96MY1 436 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-206ENST00000553529 NCOR1P1Q9H4R4 102 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 LIN7BQ9HAP6 207 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 ETAA1Q9NY74 926 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 PEX16Q9Y5Y5 336 aa14.48□□□□□ -0.09
SHMT2-206ENST00000553529 PLXNB1O43157 2135 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 HSD17B6O14756 317 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 PEX14O75381 377 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 MPIG6BO95866 241 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 IGKV1D-33P01593 117 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 IGKV1-33P01594 117 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 OPN1MWP04001 364 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 OPN1MW2P0DN77 364 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 OPN1MW3P0DN78 364 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 SLC35A2P78381 396 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 HES1Q14469 280 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 NKAPLQ5M9Q1 402 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 RBM48Q5RL73 367 aaKnown RBP14.47□□□□□ -0.09
SHMT2-206ENST00000553529 C18orf65Q6ZTR6 163 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 R3HDM4Q96D70 268 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 MND1Q9BWT6 205 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 GFOD1Q9NXC2 390 aa14.47□□□□□ -0.09
SHMT2-206ENST00000553529 A0A0A6YYD4 124 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 CD1AP06126 327 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 VSIG8P0DPA2 414 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 CEACAM3P40198 252 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 KCNJ3P48549 501 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 UNC119Q13432 240 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms