RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GNGT1P63211 74 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 PAX5Q02548 391 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 GABPB1Q06547 395 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 FLOT2Q14254 428 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 KISS1Q15726 138 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 SRSF7Q16629 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 PIGYQ3MUY2 71 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF691Q5VV52 312 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ELP2Q6IA86 826 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF491Q8N8L2 437 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 OR10K1Q8NGX5 313 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ST6GALNAC6Q969X2 333 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ISOC1Q96CN7 298 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 UBE2E2Q96LR5 201 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ALX4Q9H161 411 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 EDA2RQ9HAV5 297 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF107Q9UII5 783 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-209ENST00000553308 VSIG4Q9Y279 399 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 WSB1Q9Y6I7 421 aa7.04□□□□□ -1.28
SYNE2-209ENST00000553308 SACSQ9NZJ4 4579 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 SORL1Q92673 2214 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 TCRBV3S1A0A5B6 114 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 C15orf65H3BRN8 121 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 SDCBPO00560 298 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-209ENST00000553308 SLC31A2O15432 143 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 HTR1AP08908 422 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 OR5H8P0DN80 308 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 MYF6P23409 242 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 PPIFP30405 207 aaKnown RBP7.03□□□□□ -1.28
SYNE2-209ENST00000553308 POLR2IP36954 125 aaKnown RBP7.03□□□□□ -1.28
SYNE2-209ENST00000553308 SLURP1P55000 103 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 RUNX1Q01196 453 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 IL13RA2Q14627 380 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 KDM4DQ6B0I6 523 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 FDX2Q6P4F2 183 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 LINC00311Q8N616 119 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 SUMF2Q8NBJ7 301 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 OR8H1Q8NGG4 311 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 DLX4Q92988 240 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-209ENST00000553308 EME1Q96AY2 570 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 DPCDQ9BVM2 203 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-209ENST00000553308 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 FAM118AQ9NWS6 357 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 GFOD1Q9NXC2 390 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 ZNF580Q9UK33 172 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
SYNE2-209ENST00000553308 OR4C45A6NMZ5 311 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 GABRPO00591 440 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 ATP6V0E1O15342 81 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 SLC16A6O15403 523 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 SULT1B1O43704 296 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 IGLV1-40P01703 118 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 IL3RAP26951 378 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 KCNJ3P48549 501 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 CCR9P51686 369 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 MMDQ15546 238 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 TMEM65Q6PI78 240 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 HAPLN4Q86UW8 402 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 PXT1Q8NFP0 134 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 CCDC107Q8WV48 283 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 TNFAIP8L1Q8WVP5 186 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 ARPC1AQ92747 370 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 ARL11Q969Q4 196 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 PELI1Q96FA3 418 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 CIB1Q99828 191 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 FAM192AQ9GZU8 254 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 PARP11Q9NR21 331 aa7.02□□□□□ -1.29
SYNE2-209ENST00000553308 IGHV4OR15-8A0A075B7B6 117 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 A0A087WW49 117 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 DAPL1A0PJW8 107 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 TMEM30CPA0ZSE6 113 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 MAGEA13PA6NCF6 341 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 G3V2T6 193 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 J3QLW9 94 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 LDLRAD4O15165 306 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 HTR3BO95264 441 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 IGHV4-30-4P0DP06 118 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF19P17023 458 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 GZMHP20718 246 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 CNTFRP26992 372 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 VHLP40337 213 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 RAB9AP51151 201 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF137PP52743 207 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 TMED1Q13445 227 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 LSAMPQ13449 338 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 ALKBH1Q13686 389 aaKnown RBP7.01□□□□□ -1.29
SYNE2-209ENST00000553308 RSU1Q15404 277 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 ACSM6Q6P461 480 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 SLC25A48Q6ZT89 311 aaKnown RBP7.01□□□□□ -1.29
SYNE2-209ENST00000553308 KCTD20Q7Z5Y7 419 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 PARP16Q8N5Y8 322 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 C8orf31Q8N9H6 132 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF439Q8NDP4 499 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 OR51A2Q8NGJ7 313 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 OR52M1Q8NGK5 317 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 OR8J1Q8NGP2 316 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 OR6Q1Q8NGQ2 317 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 CASTOR1Q8WTX7 329 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms