RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SAP30LQ9HAJ7 183 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 KIF25Q9UIL4 384 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 C14orf166Q9Y224 244 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 TRBV6-7A0A0A0MS04 114 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 CD34P28906 385 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 HMGN3Q15651 99 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 CLEC18BQ6UXF7 455 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 ZFAND1Q8TCF1 268 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 KIRREL1Q96J84 757 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 EGLN1Q9GZT9 426 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 DYNLRB1Q9NP97 96 aa16.36■□□□□ 0.21
RBFOX1-215ENST00000553186 SFT2D2O95562 160 aa16.35■□□□□ 0.21
RBFOX1-215ENST00000553186 GABRA2P47869 451 aa16.35■□□□□ 0.21
RBFOX1-215ENST00000553186 MUC15Q8N387 334 aa16.35■□□□□ 0.21
RBFOX1-215ENST00000553186 CASTOR1Q8WTX7 329 aa16.35■□□□□ 0.21
RBFOX1-215ENST00000553186 WDR89Q96FK6 387 aaPredicted RBP16.35■□□□□ 0.21
RBFOX1-215ENST00000553186 MAB21L2Q9Y586 359 aa16.35■□□□□ 0.21
RBFOX1-215ENST00000553186 ABCA4P78363 2273 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 G3V3Q6 166 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 GOSR2O14653 212 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 SLC22A5O76082 557 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 SIX6O95475 246 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 GIPP09681 153 aaPredicted RBP16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 LY6G6FQ5SQ64 297 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 DCAF12L2Q5VW00 463 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 STUMQ69YW2 141 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 PHB2Q99623 299 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 CHIAQ9BZP6 476 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 TAF9BQ9HBM6 251 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 EPG5Q9HCE0 2579 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 NPIPB11E5RHQ5 1161 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 GLIPR1P48060 266 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 HERV-K104P61576 105 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 KRBOX4Q5JUW0 171 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 TEX36Q5VZQ5 186 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 ZNRF1Q8ND25 227 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 SNX22Q96L94 193 aa16.34■□□□□ 0.21
RBFOX1-215ENST00000553186 DBX1A6NMT0 343 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 K7N7A8 449 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 IRF2P14316 349 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 PIGPP57054 158 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 LIN54Q6MZP7 749 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 SLC38A6Q8IZM9 456 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 TPRX1Q8N7U7 411 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 IL1F10Q8WWZ1 152 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 RSRP1Q9BUV0 290 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 DIRAS3O95661 229 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 MUC1P15941 1255 aaPredicted RBP16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 HLA-GP17693 338 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 Q5BKY6 102 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 H1FOOQ8IZA3 346 aaPredicted RBP16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 PRR18Q8N4B5 295 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 OR2T35Q8NGX2 323 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 OR10J5Q8NHC4 309 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 SDSLQ96GA7 329 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 CLEC4MQ9H2X3 399 aaPredicted RBP16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 OR1A1Q9P1Q5 309 aa16.33■□□□□ 0.2
RBFOX1-215ENST00000553186 ARFGEF3Q5TH69 2177 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 IGKV1D-13A0A0B4J2D9 117 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 FAM172BPA6NC97 362 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 OOEPA6NGQ2 149 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 CRYM-AS1A6NIL9 109 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 LRRC30A6NM36 301 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 PRB1P04280 392 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 IGKV1-13P0DP09 117 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 ERP29P30040 261 aaKnown RBP16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 GNRHRP30968 328 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 SLC9A3R2Q15599 337 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 DEFB108BQ8NET1 73 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 OR11H4Q8NGC9 324 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 UBALD1Q8TB05 177 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 SLC2A9Q9NRM0 540 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 OPN4Q9UHM6 478 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 DYSFO75923 2080 aa16.32■□□□□ 0.2
RBFOX1-215ENST00000553186 B8ZZF3 427 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 C12orf77C9JDV5 145 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 MGST3O14880 152 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 RAP2BP61225 183 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 ANKRD55Q3KP44 614 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 C11orf88Q6PI97 169 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 LDLRAD3Q86YD5 345 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 ZNF561Q8N587 486 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 OR5M8Q8NGP6 311 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 PPP1R35Q8TAP8 253 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 RANBP3Q9H6Z4 567 aaPredicted RBP16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 TMEM178BH3BS89 294 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 C19orf84I3L1E1 186 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 HEXAP06865 529 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 SELLP14151 372 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 OR13A1Q8NGR1 328 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 HYLS1Q96M11 299 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 PRR13Q9NZ81 148 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 KCNIP1Q9NZI2 227 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 OR2W1Q9Y3N9 320 aa16.31■□□□□ 0.2
RBFOX1-215ENST00000553186 A0A0B4J2A0 478 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 A0A1B0GW55 424 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4L2P0CJ85 424 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4L3P0CJ86 424 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4L4P0CJ87 422 aa16.3■□□□□ 0.2
RBFOX1-215ENST00000553186 DUX4L5P0CJ88 424 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms