RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 OR5AU1Q8NGC0 362 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 OR51T1Q8NGJ9 327 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 OR10K1Q8NGX5 313 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 PPIL3Q9H2H8 161 aaKnown RBP9.49□□□□□ -0.89
CKAP4-202ENST00000552828 NDUFB11Q9NX14 153 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 MRPS28Q9Y2Q9 187 aaKnown RBP9.49□□□□□ -0.89
CKAP4-202ENST00000552828 KIAA2026Q5HYC2 2103 aa9.49□□□□□ -0.89
CKAP4-202ENST00000552828 DSCAML1Q8TD84 2053 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 TRDV1A0A1B0GX56 115 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 K7EIL1 84 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 F2RL2O00254 374 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 GTF2F2P13984 249 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 CD33P20138 364 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 SERPINA2P20848 420 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 EDDM3BP56851 147 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 IL13RA2Q14627 380 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 GRK1Q15835 563 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 AWAT2Q6E213 333 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 Q6P435 159 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 LYPD6Q86Y78 171 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 OSR2Q8N2R0 312 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 OR4D6Q8NGJ1 314 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 ISOC1Q96CN7 298 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 ZNF714Q96N38 554 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 CHST6Q9GZX3 395 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 ST3GAL6Q9Y274 331 aa9.48□□□□□ -0.89
CKAP4-202ENST00000552828 hADV38S2A0JD32 116 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 FUOMA2VDF0 154 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 H3BUI4 141 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 MGST3O14880 152 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 PSPNO60542 156 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 MPIG6BO95866 241 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 GALP22466 123 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 OR3A1P47881 315 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 PSMD7P51665 324 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 TMBIM6P55061 237 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 EDDM3AQ14507 147 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 NEDD8Q15843 81 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 TMEM95Q3KNT9 176 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 PIGYQ3MUY2 71 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 NHLRC3Q5JS37 347 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 SYT6Q5T7P8 510 aaPredicted RBP9.47□□□□□ -0.89
CKAP4-202ENST00000552828 CD200R1LQ6Q8B3 271 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 C16orf82Q7Z2V1 217 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 LINC00596Q86U02 117 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 CLVS1Q8IUQ0 354 aaPredicted RBP9.47□□□□□ -0.89
CKAP4-202ENST00000552828 OR13F1Q8NGS4 319 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 MRPS24Q96EL2 167 aaKnown RBP9.47□□□□□ -0.89
CKAP4-202ENST00000552828 RCC1LQ96I51 464 aaKnown RBP9.47□□□□□ -0.89
CKAP4-202ENST00000552828 TMEM133Q9H2Q1 129 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 GHRLQ9UBU3 117 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 HILPDAQ9Y5L2 63 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 LINC00312Q9Y6C7 94 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 SESN1Q9Y6P5 492 aa9.47□□□□□ -0.89
CKAP4-202ENST00000552828 IGHV2-26A0A0B4J1V2 119 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 MEX3AA1L020 520 aaKnown RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 SLC33A1O00400 549 aaPredicted RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 OR7C1O76099 320 aaPredicted RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 UBBP0CG47 229 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 CD37P11049 281 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 ERP29P30040 261 aaKnown RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 RANBP1P43487 201 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 RBM11P57052 281 aaKnown RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 KRTAP10-11P60412 298 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 PAN3Q58A45 887 aaKnown RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 C1orf100Q5SVJ3 147 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 OR4P4Q8NGL7 312 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 PPP1R14BQ96C90 147 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 BCL7BQ9BQE9 202 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 CLEC7AQ9BXN2 247 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 CST11Q9H112 138 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 LIN7BQ9HAP6 207 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 PLGRKTQ9HBL7 147 aa9.46□□□□□ -0.9
CKAP4-202ENST00000552828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.46□□□□□ -0.94e-6■■□□□ 11.4
CKAP4-202ENST00000552828 AK6Q9Y3D8 172 aaKnown RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 TSSC4Q9Y5U2 329 aaPredicted RBP9.46□□□□□ -0.9
CKAP4-202ENST00000552828 TRAV1-2A0A0B4J238 106 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 TRAV24A0A0B4J272 114 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 A0A1W2PP11 408 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 A0A1W2PRX2 142 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 PDCD5O14737 125 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 GEMIN2O14893 280 aaKnown RBP9.45□□□□□ -0.9
CKAP4-202ENST00000552828 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
CKAP4-202ENST00000552828 CRTAPO75718 401 aaPredicted RBP9.45□□□□□ -0.9
CKAP4-202ENST00000552828 DUS4LO95620 317 aaKnown RBP9.45□□□□□ -0.9
CKAP4-202ENST00000552828 CSN2P05814 226 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 PF4V1P10720 104 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 MYL9P24844 172 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 HTR1DP28221 377 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 HTR2CP28335 458 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 P2RX3P56373 397 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 AESQ08117 197 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 MPV17LQ2QL34 196 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 ARSJQ5FYB0 599 aaPredicted RBP9.45□□□□□ -0.9
CKAP4-202ENST00000552828 CENPVQ7Z7K6 275 aaPredicted RBP9.45□□□□□ -0.9
CKAP4-202ENST00000552828 TPRX1Q8N7U7 411 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 OR6M1Q8NGM8 313 aa9.45□□□□□ -0.9
CKAP4-202ENST00000552828 AKR1E2Q96JD6 320 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms