RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ABHD17BQ5VST6 288 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 TMEM252Q8N6L7 170 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 OR5C1Q8NGR4 320 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 RDH5Q92781 318 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 PLEKHF2Q9H8W4 249 aa11.16□□□□□ -0.62
CACNB3-219ENST00000551544 ZNF407Q9C0G0 2248 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 PROB1E7EW31 1015 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.62
CACNB3-219ENST00000551544 ARG1P05089 322 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 CCL20P78556 96 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 DBX2Q6ZNG2 339 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 LINC00696Q6ZRV3 163 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 LINC00470Q9BZP3 86 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 B4GALT7Q9UBV7 327 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 DNAJC13O75165 2243 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 DOCK7Q96N67 2140 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 KIR2DS1A0A191URI9 304 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 KIR2DS4P43632 304 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 KIR2DS1Q14954 304 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 IGFBP7Q16270 282 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 C20orf204Q6ZNR8 217 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
CACNB3-219ENST00000551544 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
CACNB3-219ENST00000551544 ZNF729A6NN14 1252 aaPredicted RBP11.14□□□□□ -0.63
CACNB3-219ENST00000551544 LILRA1O75019 489 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 PITX3O75364 302 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 TMEM50AO95807 157 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 IFNA17P01571 189 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 EPHA1P21709 976 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 DYNLT3P51808 116 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 CEBPGP53567 150 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 Q3ZCU0 254 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 ADAM5Q6NVV9 412 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 Q6ZS49 121 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 CMTM1Q8IZ96 169 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 C17orf78Q8N4C9 275 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 SUMF2Q8NBJ7 301 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 APH1AQ96BI3 265 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNB3-219ENST00000551544 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 R4GN57 208 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 A0A1B0GW64 132 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 CD300LBA8K4G0 201 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 ACP1P24666 158 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 RND3P61587 244 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 OR1C1Q15619 314 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 POM121Q96HA1 1249 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 YPEL4Q96NS1 127 aa11.14□□□□□ -0.63
CACNB3-219ENST00000551544 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 CHST1O43916 411 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 TUSC2O75896 110 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 SLC34A2O95436 690 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 VDAC1P21796 283 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 RAB2AP61019 212 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 RUNX1Q01196 453 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 NMSQ5H8A3 153 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 OR51H1Q8NH63 302 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 GGACTQ9BVM4 153 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 TTTY12Q9BZ98 90 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 SMDT1Q9H4I9 107 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 URB1O60287 2271 aaKnown RBP11.13□□□□□ -0.63
CACNB3-219ENST00000551544 HSPA12AO43301 675 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 SELLP14151 372 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 UCP1P25874 307 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 OR2B8PP59922 312 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 PLP2Q04941 152 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 ZNF154Q13106 437 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 C1orf210Q8IVY1 113 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 IL22RA1Q8N6P7 574 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 OR5A2Q8NGI9 324 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 IL1F10Q8WWZ1 152 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 POM121L2Q96KW2 1035 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 STRADBQ9C0K7 418 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 FOXJ2Q9P0K8 574 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 TRBV23-1A0A0A0MS06 115 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 C9orf172C9J069 976 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 PGLYRP1O75594 196 aaPredicted RBP11.13□□□□□ -0.63
CACNB3-219ENST00000551544 HOXA5P20719 270 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 HEPN1Q6WQI6 88 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 NUFIP2Q7Z417 695 aaKnown RBP11.13□□□□□ -0.63
CACNB3-219ENST00000551544 VASH2Q86V25 355 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
CACNB3-219ENST00000551544 MRPL30Q8TCC3 161 aaKnown RBP11.13□□□□□ -0.63
CACNB3-219ENST00000551544 C12orf49Q9H741 205 aa11.13□□□□□ -0.63
CACNB3-219ENST00000551544 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
CACNB3-219ENST00000551544 ANKRD30BLA7E2S9 258 aa11.12□□□□□ -0.63
CACNB3-219ENST00000551544 H3BP45 60 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms