RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HES4Q9HCC6 221 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 NANSQ9NR45 359 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 INIPQ9NRY2 104 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 UBAP1Q9NZ09 502 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 MDFICQ9P1T7 246 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 RIMS3Q9UJD0 308 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 BLOC1S6Q9UL45 172 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 PRPF19Q9UMS4 504 aaKnown RBP1.8□□□□□ -2.12
CPSF6-207ENST00000551516 NDUFAF1Q9Y375 327 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 ALMS1Q8TCU4 4167 aa1.8□□□□□ -2.12
CPSF6-207ENST00000551516 HSPG2P98160 4391 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TEX48A0A1B0GUV7 120 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 MFSD2BA6NFX1 497 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CPSF4LA6NMK7 179 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF726A6NNF4 738 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CD300LBA8K4G0 201 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 C17orf98A8MV24 154 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 H7C1C5 153 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 K7EQG2 157 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 M0R1W7 72 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 NPFFO15130 113 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 SGCEO43556 437 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ENSAO43768 121 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 NOS1APO75052 506 aaPredicted RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ZNF737O75373 536 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 SRSF10O75494 262 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 MMP23AO75900 390 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ANP32DO95626 131 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 PTHP01270 115 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 GSTT2P0CG29 244 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 GSTT2BP0CG30 244 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 UQCRBP14927 111 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 IGLL1P15814 213 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 MUC1P15941 1255 aaPredicted RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 MSR1P21757 451 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CCNOP22674 350 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 AQP1P29972 269 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 KDELR2P33947 212 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 PTGFRP43088 359 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 HTR5AP47898 357 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 GSSP48637 474 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 GDI2P50395 445 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 MFAP2P55001 183 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CAV3P56539 151 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 COPZ1P61923 177 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 LCN6P62502 163 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 FAM3AP98173 230 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 STX3Q13277 289 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 AQP6Q13520 282 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 EXOSC2Q13868 293 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 DGCR6Q14129 220 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 EIF2B1Q14232 305 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 GNA13Q14344 377 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OR8B8Q15620 311 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 MRGPRG-AS1Q2M3A8 158 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CNPY1Q3B7I2 92 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TEX30Q5JUR7 227 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TMEM42Q69YG0 159 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 DMKNQ6E0U4 476 aaPredicted RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TMEM53Q6P2H8 277 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 LINC00322Q6ZN03 302 aaPredicted RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 VMO1Q7Z5L0 202 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 LHFPL4Q7Z7J7 247 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 NDUFA11Q86Y39 141 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OFCC1Q8IZS5 231 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OR5AS1Q8N127 324 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ABHD12Q8N2K0 398 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CD177Q8N6Q3 437 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ARL6IP6Q8N6S5 226 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TRIML2Q8N7C3 387 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 FAM216BQ8N7L0 139 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 FAM86B1Q8N7N1 296 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 ZNRF1Q8ND25 227 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OR11H6Q8NGC7 330 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OR8D4Q8NGM9 314 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OR13G1Q8NGZ3 307 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 OR5K1Q8NHB7 308 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TMEM239Q8WW34 195 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 THRSPQ92748 146 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 RORBQ92753 470 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 LHX4Q969G2 390 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 SGK3Q96BR1 496 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 C12orf43Q96C57 262 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 RASD2Q96D21 266 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 SGTBQ96EQ0 304 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CHMP6Q96FZ7 201 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 SDSLQ96GA7 329 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TIMD4Q96H15 378 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CCT8L2Q96SF2 557 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 AMELYQ99218 206 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 NABP2Q9BQ15 211 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 KCNS3Q9BQ31 491 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 CCDC28BQ9BUN5 200 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TPPP3Q9BW30 176 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 POLR2J2Q9GZM3 115 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 POLR2J3Q9H1A7 115 aaKnown RBP1.79□□□□□ -2.12
CPSF6-207ENST00000551516 LINC00574Q9H8X3 128 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 JPT2Q9H910 190 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 WDR76Q9H967 626 aa1.79□□□□□ -2.12
CPSF6-207ENST00000551516 TMEM27Q9HBJ8 222 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms