RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ROBO4Q8WZ75 1007 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 HAS2Q92819 552 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 FGF14Q92915 247 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TSLPQ969D9 159 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ARRDC3Q96B67 414 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PINX1Q96BK5 328 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 C10orf35Q96D05 121 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GMPPAQ96IJ6 420 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 C18orf12Q96KH6 178 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TSPAN32Q96QS1 320 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SLC22A12Q96S37 553 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 LPAR4Q99677 370 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF2Q9BSG1 426 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ULBP3Q9BZM4 244 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TXNIPQ9H3M7 391 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NAA60Q9H7X0 242 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SDF2L1Q9HCN8 221 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 ZDHHC4Q9NPG8 344 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 G6PC2Q9NQR9 355 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PHPT1Q9NRX4 125 aaPredicted RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 GPR173Q9NS66 373 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 APOBEC3BQ9UH17 382 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NAT8Q9UHE5 227 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 AK3Q9UIJ7 227 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 NAGKQ9UJ70 344 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PADI1Q9ULC6 663 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CLEC4EQ9ULY5 219 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 PLAGL1Q9UM63 463 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 B9D1Q9UPM9 204 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 RHBDD3Q9Y3P4 386 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 CHTOPQ9Y3Y2 248 aaKnown RBP2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SCN10AQ9Y5Y9 1956 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 SCN5AQ14524 2016 aa2.81□□□□□ -1.96
CCNT1-203ENST00000550457 TP53BP1Q12888 1972 aaPredicted RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 CASP8AP2Q9UKL3 1982 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 NUP210Q8TEM1 1887 aaPredicted RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 TRAV9-1A0A075B6T8 112 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 IGLV1-36A0A0B4J1U3 117 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 A0A1W2PPC4 97 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 MAP1LC3B2A6NCE7 125 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 NKX6-3A6NJ46 265 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF727A8MUV8 499 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 HIDE1A8MVS5 230 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 A8MXE2 369 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 B4E171 279 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 C4orf51C9J302 202 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SMAD9O15198 467 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 NKX2-8O15522 239 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SOX15O60248 233 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SEMA4FO95754 770 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SCGB1D1O95968 90 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 PNPP00491 289 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 HPRT1P00492 218 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 TIMP1P01033 207 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 HRASP01112 189 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 IFNA5P01569 189 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 IGLV2-11P01706 119 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 HLA-HP01893 362 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 PPBPP02775 128 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 PFN1P07737 140 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SNRPCP09234 159 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 QDPRP09417 244 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 H2BFMP0C1H6 154 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 THEGLP0DJG4 465 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 GIMD1P0DJR0 217 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 BCL2P10415 239 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ESDP10768 282 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SLC25A6P12236 298 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 CYBAP13498 195 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 GLRA1P23415 457 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 PSMB5P28074 263 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 EPHA8P29322 1005 aaPredicted RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 BRS3P32247 399 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ZNF93P35789 620 aaPredicted RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ARR3P36575 388 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 GNG10P50151 68 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 EMDP50402 254 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 DAP3P51398 398 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SNU13P55769 128 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 CLDN2P57739 230 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 FOXL2P58012 376 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 TAS2R30P59541 319 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SELENOTP62341 195 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 RPL19P84098 196 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SERF2P84101 59 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 EWSR1Q01844 656 aaKnown RBP eCLIP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 FOXF1Q12946 379 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 IL24Q13007 206 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ARFRP1Q13795 201 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 RUNX2Q13950 521 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ELAVL3Q14576 367 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 TMEM187Q14656 261 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SHHQ15465 462 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 OR8B8Q15620 311 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 SGCBQ16585 318 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 HNRNPA1L2Q32P51 320 aaKnown RBP2.8□□□□□ -1.96
CCNT1-203ENST00000550457 AARDQ4LEZ3 155 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ABCA11PQ4W5N1 156 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 PDZD11Q5EBL8 140 aa2.8□□□□□ -1.96
CCNT1-203ENST00000550457 ACTL10Q5JWF8 245 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms