RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TENM2Q9NT68 2774 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 SERPINE3A8MV23 424 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 NUDT19A8MXV4 375 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 GABRPO00591 440 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 HSPB6O14558 160 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 EI24O14681 340 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 MAGEB3O15480 346 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 FADS2O95864 444 aaKnown RBP6.01□□□□□ -1.45
NEK3-201ENST00000550331 IGHG2P01859 326 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 RAB3AP20336 220 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 GNG10P50151 68 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 ZNF816Q0VGE8 651 aaPredicted RBP6.01□□□□□ -1.45
NEK3-201ENST00000550331 EBI3Q14213 229 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 HES1Q14469 280 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 ZNF529Q6P280 563 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 SLC35E3Q7Z769 313 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 TGIF2LXQ8IUE1 241 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 ZNF695Q8IW36 515 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 STPG2Q8N412 459 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 KLHL30-AS1Q8NEE0 82 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 OR10X1Q8NGY0 326 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 OR5AK2Q8NH90 309 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 MRGPRDQ8TDS7 321 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 FBLIM1Q8WUP2 373 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 TNFAIP8L1Q8WVP5 186 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 TSEN15Q8WW01 171 aaKnown RBP6.01□□□□□ -1.45
NEK3-201ENST00000550331 LGALS12Q96DT0 336 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 LYSTQ99698 3801 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 GON7Q9BXV9 100 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 IFT22Q9H7X7 185 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 DHDHQ9UQ10 334 aa6.01□□□□□ -1.45
NEK3-201ENST00000550331 H0YHG0 523 aa6□□□□□ -1.45
NEK3-201ENST00000550331 C3orf84H3BNL1 204 aa6□□□□□ -1.45
NEK3-201ENST00000550331 AP4M1O00189 453 aa6□□□□□ -1.45
NEK3-201ENST00000550331 HSD17B6O14756 317 aa6□□□□□ -1.45
NEK3-201ENST00000550331 MPZL2O60487 215 aa6□□□□□ -1.45
NEK3-201ENST00000550331 RAMP3O60896 148 aa6□□□□□ -1.45
NEK3-201ENST00000550331 CIB2O75838 187 aa6□□□□□ -1.45
NEK3-201ENST00000550331 IGKV1D-33P01593 117 aa6□□□□□ -1.45
NEK3-201ENST00000550331 IGKV1-33P01594 117 aa6□□□□□ -1.45
NEK3-201ENST00000550331 IGHV3-7P01780 117 aa6□□□□□ -1.45
NEK3-201ENST00000550331 GAPDHP04406 335 aaKnown RBP6□□□□□ -1.45
NEK3-201ENST00000550331 CD2P06729 351 aa6□□□□□ -1.45
NEK3-201ENST00000550331 GABRB1P18505 474 aa6□□□□□ -1.45
NEK3-201ENST00000550331 GZMHP20718 246 aa6□□□□□ -1.45
NEK3-201ENST00000550331 SSTR5P35346 364 aa6□□□□□ -1.45
NEK3-201ENST00000550331 ALDH3A2P51648 485 aa6□□□□□ -1.45
NEK3-201ENST00000550331 DGCR2P98153 550 aa6□□□□□ -1.45
NEK3-201ENST00000550331 RAB40BQ12829 278 aa6□□□□□ -1.45
NEK3-201ENST00000550331 DIAPH2-AS1Q14236 149 aa6□□□□□ -1.45
NEK3-201ENST00000550331 HNF4GQ14541 408 aa6□□□□□ -1.45
NEK3-201ENST00000550331 RSU1Q15404 277 aa6□□□□□ -1.45
NEK3-201ENST00000550331 ZSCAN26Q16670 478 aa6□□□□□ -1.45
NEK3-201ENST00000550331 PIGYQ3MUY2 71 aa6□□□□□ -1.45
NEK3-201ENST00000550331 NHLRC3Q5JS37 347 aa6□□□□□ -1.45
NEK3-201ENST00000550331 LPCAT4Q643R3 524 aa6□□□□□ -1.45
NEK3-201ENST00000550331 CDPF1Q6NVV7 123 aa6□□□□□ -1.45
NEK3-201ENST00000550331 TEX38Q6PEX7 206 aa6□□□□□ -1.45
NEK3-201ENST00000550331 UNQ9370/PRO34162Q6UXP9 181 aa6□□□□□ -1.45
NEK3-201ENST00000550331 ASCL4Q6XD76 172 aa6□□□□□ -1.45
NEK3-201ENST00000550331 LINC00596Q86U02 117 aa6□□□□□ -1.45
NEK3-201ENST00000550331 LHFPL3Q86UP9 236 aa6□□□□□ -1.45
NEK3-201ENST00000550331 IZUMO1Q8IYV9 350 aa6□□□□□ -1.45
NEK3-201ENST00000550331 Q8N6K4 173 aa6□□□□□ -1.45
NEK3-201ENST00000550331 C8orf31Q8N9H6 132 aa6□□□□□ -1.45
NEK3-201ENST00000550331 OR52M1Q8NGK5 317 aa6□□□□□ -1.45
NEK3-201ENST00000550331 PLPPR1Q8TBJ4 325 aa6□□□□□ -1.45
NEK3-201ENST00000550331 LEAP2Q969E1 77 aa6□□□□□ -1.45
NEK3-201ENST00000550331 Q96MT0 163 aa6□□□□□ -1.45
NEK3-201ENST00000550331 NOL4LQ96MY1 436 aaPredicted RBP6□□□□□ -1.45
NEK3-201ENST00000550331 NR1H4Q96RI1 486 aaPredicted RBP6□□□□□ -1.45
NEK3-201ENST00000550331 GPER1Q99527 375 aa6□□□□□ -1.45
NEK3-201ENST00000550331 PDCD1LG2Q9BQ51 273 aa6□□□□□ -1.45
NEK3-201ENST00000550331 DPCDQ9BVM2 203 aaPredicted RBP6□□□□□ -1.45
NEK3-201ENST00000550331 FAM192AQ9GZU8 254 aa6□□□□□ -1.45
NEK3-201ENST00000550331 ISG20L2Q9H9L3 353 aaKnown RBP6□□□□□ -1.45
NEK3-201ENST00000550331 LIN7CQ9NUP9 197 aaKnown RBP6□□□□□ -1.45
NEK3-201ENST00000550331 FAM118AQ9NWS6 357 aa6□□□□□ -1.45
NEK3-201ENST00000550331 ERVK13-1Q9NX77 482 aa6□□□□□ -1.45
NEK3-201ENST00000550331 IL36GQ9NZH8 169 aa6□□□□□ -1.45
NEK3-201ENST00000550331 HUWE1Q7Z6Z7 4374 aaKnown RBP6□□□□□ -1.45
NEK3-201ENST00000550331 STAB2Q8WWQ8 2551 aa6□□□□□ -1.45
NEK3-201ENST00000550331 HYDINQ4G0P3 5121 aa6□□□□□ -1.45
NEK3-201ENST00000550331 IGHV1-3A0A0C4DH29 117 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 TMEM30CPA0ZSE6 113 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 E9PI62 339 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 C15orf65H3BRN8 121 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 CCL24O00175 119 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 CCRL2O00421 344 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 DYNC1I1O14576 645 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 TXNL1O43396 289 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR7C1O76099 320 aaPredicted RBP5.99□□□□□ -1.45
NEK3-201ENST00000550331 HTR3BO95264 441 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 GBX2P52951 348 aaPredicted RBP5.99□□□□□ -1.45
NEK3-201ENST00000550331 LTC4SQ16873 150 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 PNLIPRP3Q17RR3 467 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 MPV17LQ2QL34 196 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 TMEM30BQ3MIR4 351 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 Q3ZCU0 254 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 CCDC58Q4VC31 144 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms