RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 EWSR1Q01844 656 aaKnown RBP eCLIP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 ID3Q02535 119 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF273Q14593 569 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 HERPUD1Q15011 391 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 SMIM21Q3B7S5 101 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 NMSQ5H8A3 153 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 C10orf91Q5T1B1 145 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 MBNL2Q5VZF2 373 aaKnown RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 SLC35E4Q6ICL7 350 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 PCSK4Q6UW60 755 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 BTNL8Q6UX41 500 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 DPPA3Q6W0C5 159 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 Q6ZPA2 131 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 Q6ZRG5 221 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 STX12Q86Y82 276 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 FAM90A1Q86YD7 464 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 GCNT2Q8N0V5 402 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 BATF2Q8N1L9 274 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 OR52M1Q8NGK5 317 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 PPP1R35Q8TAP8 253 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 KLF14Q8TD94 323 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 NINJ1Q92982 152 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 GALMQ96C23 342 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 CYYR1Q96J86 154 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 SEBOXQ9HB31 216 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 HES4Q9HCC6 221 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 RAB9BQ9NP90 201 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 LYRM2Q9NU23 88 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 MBNL3Q9NUK0 354 aaKnown RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 UQCC1Q9NVA1 299 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 CRIM1Q9NZV1 1036 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 ERRFI1Q9UJM3 462 aaPredicted RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 KPTNQ9Y664 436 aa7.6□□□□□ -1.19
TMEM116-209ENST00000550020 TNRC6AQ8NDV7 1962 aaKnown RBP7.6□□□□□ -1.19
TMEM116-209ENST00000550020 IGKV1-6A0A0C4DH72 117 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 MBD3L4A6NDZ8 208 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 MBD3L3A6NE82 208 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 OOEPA6NGQ2 149 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 MBD3L5A6NJ08 208 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 SIRPB1O00241 398 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 ABCD4O14678 606 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 CDIPTO14735 213 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 WDR1O75083 606 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 RHBDL1O75783 438 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 LY86O95711 162 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 IFNA5P01569 189 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 IGLV1-44P01699 117 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 GRPP07492 148 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 LMO1P25800 156 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 TAS2R30P59541 319 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 PSG7Q13046 419 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF154Q13106 437 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 CATR1Q13166 79 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 RTP5Q14D33 572 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 IGFBP7Q16270 282 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 BHLHA15Q7RTS1 189 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 FAM219AQ8IW50 185 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 KDF1Q8NAX2 398 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 DMBX1Q8NFW5 382 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 MBD3L2Q8NHZ7 208 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 LYPD6BQ8NI32 183 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 IL1F10Q8WWZ1 152 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 ZNF488Q96MN9 340 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.19
TMEM116-209ENST00000550020 SMIM3Q9BZL3 60 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 TLNRD1Q9H1K6 362 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 IL36RNQ9UBH0 155 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 KCNS2Q9ULS6 477 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 WASF3Q9UPY6 502 aa7.59□□□□□ -1.19
TMEM116-209ENST00000550020 IGKV1D-13A0A0B4J2D9 117 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 OR5H1A6NKK0 313 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 A6NLC8 198 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 FAM90A26D6RGX4 464 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 TOR1AO14656 332 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 SSSCA1O60232 199 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 LILRA1O75019 489 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 ZNF205O95201 554 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 HBE1P02100 147 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 CELA3BP08861 270 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 IGKV1-13P0DP09 117 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 GLI4P10075 376 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 RCC1P18754 421 aaPredicted RBP7.58□□□□□ -1.2
TMEM116-209ENST00000550020 ATF4P18848 351 aaPredicted RBP7.58□□□□□ -1.2
TMEM116-209ENST00000550020 IL2RGP31785 369 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 LPAR6P43657 344 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 RPS23P62266 143 aaKnown RBP7.58□□□□□ -1.2
TMEM116-209ENST00000550020 MST1LQ2TV78 715 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 KRTCAP3Q53RY4 240 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 SSX8Q7RTT4 187 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 TMEM252Q8N6L7 170 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 WDR31Q8NA23 367 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 C9orf106Q8NAJ2 232 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 OR10Z1Q8NGY1 313 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 LURAP1Q96LR2 239 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 HS3ST6Q96QI5 342 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 UNKLQ9H9P5 680 aaKnown RBP7.58□□□□□ -1.2
TMEM116-209ENST00000550020 ZNF71Q9NQZ8 489 aaPredicted RBP7.58□□□□□ -1.2
TMEM116-209ENST00000550020 C19orf12Q9NSK7 152 aa7.58□□□□□ -1.2
TMEM116-209ENST00000550020 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms