RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 APH1BQ8WW43 257 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 C4orf36Q96KX1 117 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 Q96MT0 163 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 GON7Q9BXV9 100 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 SCN3BQ9NY72 215 aa10.14□□□□□ -0.79
PTCH1-218ENST00000548945 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
PTCH1-218ENST00000548945 AP4M1O00189 453 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 VSIG8P0DPA2 414 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 CRHBPP24387 322 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 GALEQ14376 348 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 LAIR2Q6ISS4 152 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 TEX38Q6PEX7 206 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 TGIF2LXQ8IUE1 241 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 IZUMO1Q8IYV9 350 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 BPIFB6Q8NFQ5 453 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 OR10X1Q8NGY0 326 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 IFT22Q9H7X7 185 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 PLCXD1Q9NUJ7 323 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 TPRKBQ9Y3C4 175 aa10.13□□□□□ -0.79
PTCH1-218ENST00000548945 CCRL2O00421 344 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 HSPB6O14558 160 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 HSD17B6O14756 317 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 MAGEB3O15480 346 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 ZFPL1O95159 310 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 IGHV3-7P01780 117 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 GAPDHP04406 335 aaKnown RBP10.12□□□□□ -0.79
PTCH1-218ENST00000548945 GZMHP20718 246 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 HNF4GQ14541 408 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 NHLRC3Q5JS37 347 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 ZNF529Q6P280 563 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 ASCL4Q6XD76 172 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 RNF152Q8N8N0 203 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 C8orf31Q8N9H6 132 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 TSPAN14Q8NG11 270 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 OR52M1Q8NGK5 317 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 OR5AK2Q8NH90 309 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 MRGPRDQ8TDS7 321 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 LEAP2Q969E1 77 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 LGALS12Q96DT0 336 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 RAX2Q96IS3 184 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 ALG8Q9BVK2 526 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 MRPS26Q9BYN8 205 aaKnown RBP10.12□□□□□ -0.79
PTCH1-218ENST00000548945 ABCG5Q9H222 651 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 LIN7CQ9NUP9 197 aaKnown RBP10.12□□□□□ -0.79
PTCH1-218ENST00000548945 AASSQ9UDR5 926 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 DHDHQ9UQ10 334 aa10.12□□□□□ -0.79
PTCH1-218ENST00000548945 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 A0A087WXM4 84 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 IGHV1-3A0A0C4DH29 117 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 CCL24O00175 119 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 SMIM18P0DKX4 95 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 RAB3AP20336 220 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 SSTR5P35346 364 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 GPR12P47775 334 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-218ENST00000548945 RSU1Q15404 277 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 PNLIPRP3Q17RR3 467 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 KLHL22Q53GT1 634 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 LINC00311Q8N616 119 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 Q8N6K4 173 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 OR2T10Q8NGZ9 312 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 OR8U1Q8NH10 309 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 PLPPR1Q8TBJ4 325 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 TNFAIP8L1Q8WVP5 186 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 EAF1Q96JC9 268 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-218ENST00000548945 DPCDQ9BVM2 203 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-218ENST00000548945 IL36GQ9NZH8 169 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 LINC00527Q9UJ94 153 aa10.11□□□□□ -0.79
PTCH1-218ENST00000548945 EFCAB10A6NFE3 127 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 GABRPO00591 440 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 FADS2O95864 444 aaKnown RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 ELANEP08246 267 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 CD1BP29016 333 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 GNG10P50151 68 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 FOXE3Q13461 319 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 KIR2DS1Q14954 304 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 SMN1Q16637 294 aaKnown RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 PIGYQ3MUY2 71 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 Q3ZCU0 254 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 CXorf66Q5JRM2 361 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 ZNF773Q6PK81 442 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 LINC00596Q86U02 117 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 LHFPL3Q86UP9 236 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 SUMF2Q8NBJ7 301 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 OR8H1Q8NGG4 311 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 OR5M8Q8NGP6 311 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 TSEN15Q8WW01 171 aaKnown RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 GPER1Q99527 375 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 PDCD1LG2Q9BQ51 273 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 DUSP21Q9H596 190 aa10.1□□□□□ -0.79
PTCH1-218ENST00000548945 ISG20L2Q9H9L3 353 aaKnown RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 CNOT2Q9NZN8 540 aaKnown RBP10.1□□□□□ -0.79
PTCH1-218ENST00000548945 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms