RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GPR84Q9NQS5 396 aa10.7□□□□□ -0.7
CDX2-202ENST00000548877 PIGLQ9Y2B2 252 aa10.7□□□□□ -0.7
CDX2-202ENST00000548877 TMEM269A0A1B0GVZ9 245 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 TMEM82A0PJX8 343 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 MEX3AA1L020 520 aaKnown RBP10.69□□□□□ -0.7
CDX2-202ENST00000548877 RGS5O15539 181 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 UCHL1P09936 223 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 CD34P28906 385 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 PSMD7P51665 324 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 HSD17B12Q53GQ0 312 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 CLVS2Q5SYC1 327 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 C18orf65Q6ZTR6 163 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 OR2G2Q8NGZ5 317 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 ZNF596Q8TC21 504 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 OR51E1Q8TCB6 317 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 GPR148Q8TDV2 347 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 CHPT1Q8WUD6 406 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 CCDC32Q9BV29 185 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 PBOV1Q9GZY1 135 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 NUFIP1Q9UHK0 495 aaKnown RBP10.69□□□□□ -0.7
CDX2-202ENST00000548877 KIAA2026Q5HYC2 2103 aa10.69□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 SH2D7A6NKC9 451 aaPredicted RBP10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A9PA6NNJ1 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 DHRS7CA6NNS2 312 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 LEUTXA8MZ59 168 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 OOSP1A8MZH6 123 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 MMP23AO75900 390 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 RPP14O95059 124 aaKnown RBP10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 PTBP1P26599 531 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDX2-202ENST00000548877 ERP29P30040 261 aaKnown RBP10.68□□□□□ -0.7
CDX2-202ENST00000548877 RANBP1P43487 201 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 OR3A4PP47883 348 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 Q499Y3 187 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 OR52W1Q6IF63 320 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 ZNF329Q86UD4 541 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 CCDC190Q86UF4 302 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 THNSL2Q86YJ6 484 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 ABHD12Q8N2K0 398 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 Q8NFD4 153 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 CREB3L1Q96BA8 519 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 PRR25Q96S07 402 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 ASCL2Q99929 193 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 TTTY10Q9BZA0 68 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 BARHL1Q9BZE3 327 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 UBE2J1Q9Y385 318 aaPredicted RBP10.68□□□□□ -0.7
CDX2-202ENST00000548877 V9GYS6 101 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 CSMD3Q7Z407 3707 aa10.68□□□□□ -0.7
CDX2-202ENST00000548877 F8VVB4 439 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 F8VWA3 439 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 PSMD9O00233 223 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 RAB3BP20337 219 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 C9orf66Q5T8R8 295 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 HEPN1Q6WQI6 88 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 ZNF695Q8IW36 515 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 KLHL30-AS1Q8NEE0 82 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 OR52N4Q8NGI2 321 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 RAX2Q96IS3 184 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 MOB1AQ9H8S9 216 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 GPR173Q9NS66 373 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 MTCH1Q9NZJ7 389 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 RABL2AQ9UBK7 228 aaPredicted RBP10.67□□□□□ -0.7
CDX2-202ENST00000548877 RABL2BQ9UNT1 228 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 MOB4Q9Y3A3 225 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 R4GMQ9 66 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 SORL1Q92673 2214 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 STARD9Q9P2P6 4700 aa10.67□□□□□ -0.7
CDX2-202ENST00000548877 A0A087X0M5 115 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 TRBV5-5A0A0J9YX44 114 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 A0A1B0GX30 115 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 OR4C45A6NMZ5 311 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 NOTOA8MTQ0 251 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 NUDT19A8MXV4 375 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 CCL24O00175 119 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 MAGEB4O15481 346 aaPredicted RBP10.66□□□□□ -0.7
CDX2-202ENST00000548877 SRSF10O75494 262 aaKnown RBP10.66□□□□□ -0.7
CDX2-202ENST00000548877 TTRP02766 147 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 CD2P06729 351 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 UBCP0CG48 685 aaKnown RBP10.66□□□□□ -0.7
CDX2-202ENST00000548877 CEACAM3P40198 252 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 RPS11P62280 158 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDX2-202ENST00000548877 EDDM3AQ14507 147 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 RGS21Q2M5E4 152 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 C9orf152Q5JTZ5 239 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 TPTE2P1Q5T6R2 138 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 CCDC144NLQ6NUI1 221 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 COMMD2Q86X83 199 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 ANGPTL5Q86XS5 388 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 BATF2Q8N1L9 274 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 OR14K1Q8NGZ2 314 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms