RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TMEM80Q96HE8 168 aa5.34□□□□□ -1.55
SCAF11-211ENST00000547950 DPCDQ9BVM2 203 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-211ENST00000547950 TMEM138Q9NPI0 162 aa5.34□□□□□ -1.55
SCAF11-211ENST00000547950 ZNF281Q9Y2X9 895 aa5.34□□□□□ -1.55
SCAF11-211ENST00000547950 AMMECR1Q9Y4X0 333 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-211ENST00000547950 WNK1Q9H4A3 2382 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 PNMA8CA0A1B0GUJ8 204 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 A0A1W2PP11 408 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 IRGMA1A4Y4 181 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 NPIPB11E5RHQ5 1161 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 M0QZK8 103 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 LALBAP00709 142 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 IL1AP01583 271 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 PF4P02776 101 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 GZMHP20718 246 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 SSTR5P35346 364 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 REG1BP48304 166 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 KCNJ3P48549 501 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 RIPK1Q13546 671 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 IL13RA2Q14627 380 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 SLC22A6Q4U2R8 563 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 TTC23Q5W5X9 447 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 Q6ZPA2 131 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 MOB3BQ86TA1 216 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF329Q86UD4 541 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 THNSL2Q86YJ6 484 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 DHRSXQ8N5I4 330 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 Q8NFD4 153 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 OR4X2Q8NGF9 303 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 OR13C5Q8NGS8 318 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 MRAPQ8TCY5 172 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 NEK7Q8TDX7 302 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 ARL11Q969Q4 196 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 PHF21AQ96BD5 680 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 SMIM19Q96E16 107 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF184Q99676 751 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-211ENST00000547950 NCOR1P1Q9H4R4 102 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 LINC00574Q9H8X3 128 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 PCDHB16Q9NRJ7 776 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 NECAP2Q9NVZ3 263 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 PAK1IP1Q9NWT1 392 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-211ENST00000547950 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-211ENST00000547950 CKLFQ9UBR5 152 aa5.33□□□□□ -1.56
SCAF11-211ENST00000547950 DIMT1Q9UNQ2 313 aaKnown RBP5.33□□□□□ -1.56
SCAF11-211ENST00000547950 EXOSC1Q9Y3B2 195 aaKnown RBP5.33□□□□□ -1.56
SCAF11-211ENST00000547950 TSSC4Q9Y5U2 329 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-211ENST00000547950 IGHV3-43A0A0B4J1X8 118 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 TMEM30CPA0ZSE6 113 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 PSMB11A5LHX3 300 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A18PA6NE21 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A16PA6NEW6 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A20PA6NIJ5 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A9PA6NNJ1 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 NCBP2LA6PVI3 153 aaKnown RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 SERPINE3A8MV23 424 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A12PA8MX19 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A5PA8MXJ8 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 CCRL2O00421 344 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 SDCBPO00560 298 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 PIN1P1O15428 100 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 ZNF780AO75290 641 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 IGKV1D-33P01593 117 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 IGKV1-33P01594 117 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 MT-ND4P03905 459 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 GAPDHP04406 335 aaKnown RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A15PP0C7V4 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A13PP0C7W8 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A14PP0C7W9 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM90A24PP0C7X0 464 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 IGHV3-43DP0DP04 118 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 GTF2F2P13984 249 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 TMEM11P17152 192 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 IGFBP3P17936 291 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 RAB7AP51149 207 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 RBM11P57052 281 aaKnown RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 LOXL3P58215 753 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 ST3GAL4Q11206 333 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 MED21Q13503 144 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 Q499Y3 187 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FOXB2Q5VYV0 432 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 DMKNQ6E0U4 476 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 FAM53AQ6NSI3 398 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 GLIPR1L1Q6UWM5 242 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 SLC16A12Q6ZSM3 486 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 REC114Q7Z4M0 266 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 PRR18Q8N4B5 295 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 STX19Q8N4C7 294 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 SETD9Q8NE22 299 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 WFDC9Q8NEX5 89 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 OR10A7Q8NGE5 316 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 GGHQ92820 318 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 MUL1Q969V5 352 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 NOL4LQ96MY1 436 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 RDH12Q96NR8 316 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 AURKAIP1Q9NWT8 199 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-211ENST00000547950 IL36GQ9NZH8 169 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 LINC00527Q9UJ94 153 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 TRAPPC2LQ9UL33 140 aa5.32□□□□□ -1.56
SCAF11-211ENST00000547950 MRPS28Q9Y2Q9 187 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms