RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR4X2Q8NGF9 303 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 CYGBQ8WWM9 190 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 GGHQ92820 318 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 RBMXL1Q96E39 390 aaKnown RBP10.57□□□□□ -0.72
CPSF6-204ENST00000547486 TMEM80Q96HE8 168 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 CYYR1Q96J86 154 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 NOL4LQ96MY1 436 aaPredicted RBP10.57□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF184Q99676 751 aaPredicted RBP10.57□□□□□ -0.72
CPSF6-204ENST00000547486 PCDHB16Q9NRJ7 776 aa10.57□□□□□ -0.72
CPSF6-204ENST00000547486 EXOSC1Q9Y3B2 195 aaKnown RBP10.57□□□□□ -0.72
CPSF6-204ENST00000547486 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 IGKV1D-33P01593 117 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 IGKV1-33P01594 117 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 TMEM11P17152 192 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 MYL12AP19105 171 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 REG1BP48304 166 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 RAB7AP51149 207 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 ADARB1P78563 741 aaKnown RBP10.56□□□□□ -0.72
CPSF6-204ENST00000547486 RIPK1Q13546 671 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 SLC22A6Q4U2R8 563 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 ATAD3CQ5T2N8 411 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 OR10X1Q8NGY0 326 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 ARL11Q969Q4 196 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 LINC00527Q9UJ94 153 aa10.56□□□□□ -0.72
CPSF6-204ENST00000547486 TRBV5-7A0A0A0MS05 114 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 IGHV3-43A0A0B4J1X8 118 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 IGHV3-72A0A0B4J1Y9 119 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 TMEM30CPA0ZSE6 113 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 PSMB11A5LHX3 300 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 HSD17B6O14756 317 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 PF4P02776 101 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 IGHV3-43DP0DP04 118 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 GTF2F2P13984 249 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 ST3GAL4Q11206 333 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 EBI3Q14213 229 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 MPV17LQ2QL34 196 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 Q499Y3 187 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 YIF1BQ5BJH7 314 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 KHDC1LQ5JSQ8 128 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 TTC23Q5W5X9 447 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 MOB3BQ86TA1 216 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 OR8H3Q8N146 312 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 MUL1Q969V5 352 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 ST6GALNAC6Q969X2 333 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 OR14A2Q96R54 314 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 S100A13Q99584 98 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 DNAH3Q8TD57 4116 aa10.55□□□□□ -0.72
CPSF6-204ENST00000547486 IGHV1-3A0A0C4DH29 117 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 PNMA8CA0A1B0GUJ8 204 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF736B4DX44 427 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 CCRL2O00421 344 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 SDCBPO00560 298 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 SLC31A2O15432 143 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 FGF16O43320 207 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 ORC5O43913 435 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF780AO75290 641 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 GAPDHP04406 335 aaKnown RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 GNAO1P09471 354 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 VHLP40337 213 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF134P52741 427 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 ZNF816Q0VGE8 651 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 GLIPR1L1Q6UWM5 242 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 LINC00596Q86U02 117 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 DHRSXQ8N5I4 330 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 LINC00482Q8N8I6 264 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 OR52M1Q8NGK5 317 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 EAF1Q96JC9 268 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 PAK1IP1Q9NWT1 392 aaPredicted RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
CPSF6-204ENST00000547486 GFOD1Q9NXC2 390 aa10.54□□□□□ -0.72
CPSF6-204ENST00000547486 C12orf77C9JDV5 145 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 MPIG6BO95866 241 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 IGHG2P01859 326 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 MAS1P04201 325 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 FSTP19883 344 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 SLC35A2P78381 396 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 C5orf24Q7Z6I8 188 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 MRPL41Q8IXM3 137 aaKnown RBP10.53□□□□□ -0.72
CPSF6-204ENST00000547486 JAGN1Q8N5M9 183 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 Q8N6K4 173 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 C8orf31Q8N9H6 132 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 TMEM104Q8NE00 496 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 SETD9Q8NE22 299 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 OR4K15Q8NH41 348 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 NEK7Q8TDX7 302 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 BANF2Q9H503 90 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 PLSCR3Q9NRY6 295 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
CPSF6-204ENST00000547486 CKLFQ9UBR5 152 aa10.53□□□□□ -0.72
CPSF6-204ENST00000547486 MRPS28Q9Y2Q9 187 aaKnown RBP10.53□□□□□ -0.72
CPSF6-204ENST00000547486 NCBP2LA6PVI3 153 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms