RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 FOXJ2Q9P0K8 574 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 LRFN1Q9P244 771 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 HSD17B6O14756 317 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 COX6A1P12074 109 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 MYF5P13349 255 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 TCN2P20062 427 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 HERV-K104P61576 105 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 LYSMD4Q5XG99 296 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 CDX2Q99626 313 aaPredicted RBP11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 PRR13Q9NZ81 148 aa11.86□□□□□ -0.51
SLC38A1-204ENST00000546893 LY6G6EA0A0G2JKS1 128 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 MASP2O00187 686 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 C1QL1O75973 258 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 MDKP21741 143 aaPredicted RBP11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 S100A7P31151 101 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 MLF1P58340 268 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 RND3P61587 244 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 SAXO1Q8IYX7 474 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 TMEM156Q8N614 296 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 NUDT10Q8NFP7 164 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 MRGPRDQ8TDS7 321 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 MSL2Q9HCI7 577 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 U3KQA8 63 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 IGKV1D-8A0A087WSZ0 117 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 ZNF816-ZNF321PA0A0X1KG74 233 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 PPP1CCP36873 323 aaKnown RBP11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 TNFSF10P50591 281 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 DUSP3P51452 185 aaPredicted RBP11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 IDH3GP51553 393 aaPredicted RBP11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 RPS19BP1Q86WX3 136 aaKnown RBP11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 OR4X1Q8NH49 305 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 OR2J1Q9GZK6 312 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 SEPSECSQ9HD40 501 aaKnown RBP11.85□□□□□ -0.51
SLC38A1-204ENST00000546893 SEC16AO15027 2179 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 NSG1A0A0A6YYJ2 146 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 A0A1B0GV50 99 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 MED19A0JLT2 244 aaPredicted RBP11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 K7ESF4 209 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 LCATP04180 440 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 FUT3P21217 361 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 CAMLGP49069 296 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 CLDN15P56746 228 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 TAF9Q16594 264 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 FBXW12Q6X9E4 464 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 NUFIP2Q7Z417 695 aaKnown RBP11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 WDR5BQ86VZ2 330 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 OR2Y1Q8NGV0 311 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 SPSB4Q96A44 273 aa11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
SLC38A1-204ENST00000546893 A0A0J9YW62 118 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 FAM230AA0A1W2PPH8 454 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 TMEM238C9JI98 176 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 IFNL4K9M1U5 179 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 PPBPP02775 128 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 CTXN2P0C2S0 81 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 CCL3P10147 92 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 ANOS1P23352 680 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 RAB7AP51149 207 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 BATFQ16520 125 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 COA6Q5JTJ3 125 aaKnown RBP11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 C1orf87Q8N0U7 546 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 AGBL5Q8NDL9 886 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 PRDM14Q9GZV8 571 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 PROK2Q9HC23 129 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.51
SLC38A1-204ENST00000546893 SPAG17Q6Q759 2223 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 hCG_38984A0A1B0GV85 526 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 C20orf202A1L168 122 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 C5orf63A6NC05 138 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 NOVA1P51513 510 aaKnown RBP11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 ELLP55199 621 aaPredicted RBP11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 LCN10Q6JVE6 187 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 OR1L6Q8NGR2 347 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 IL22RA2Q969J5 263 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 HIPK2Q9H2X6 1198 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 ARID1AO14497 2285 aa11.83□□□□□ -0.52
SLC38A1-204ENST00000546893 SCGB1D2O95969 90 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 HPRT1P00492 218 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 DBHP09172 617 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 RBM11P57052 281 aaKnown RBP11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 COL10A1Q03692 680 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 BAXQ07812 192 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 DPPA3Q6W0C5 159 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 AAED1Q7RTV5 226 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 GCNT2Q8N0V5 402 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 OR4D5Q8NGN0 318 aa11.82□□□□□ -0.52
SLC38A1-204ENST00000546893 TOMM40LQ969M1 308 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms