RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 RAB7AP51149 207 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 PAX5Q02548 391 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 TMPRSS11AQ6ZMR5 421 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 LINC00482Q8N8I6 264 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 ARL11Q969Q4 196 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 S100A13Q99584 98 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 BABAM2Q9NXR7 383 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 IL36GQ9NZH8 169 aa11.32□□□□□ -0.6
TROAP-203ENST00000546735 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 TMEM30CPA0ZSE6 113 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 CCRL2O00421 344 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 IGFBP3P17936 291 aaPredicted RBP11.31□□□□□ -0.6
TROAP-203ENST00000546735 RIPK1Q13546 671 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 LRRC36Q1X8D7 754 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 MRPL41Q8IXM3 137 aaKnown RBP11.31□□□□□ -0.6
TROAP-203ENST00000546735 OR8H3Q8N146 312 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 GHSRQ92847 366 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
TROAP-203ENST00000546735 CYYR1Q96J86 154 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 ZNF184Q99676 751 aaPredicted RBP11.31□□□□□ -0.6
TROAP-203ENST00000546735 IFT22Q9H7X7 185 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
TROAP-203ENST00000546735 TRAV8-7A0A075B6U6 113 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 SDCBPO00560 298 aaPredicted RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 SLC31A2O15432 143 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 FGF16O43320 207 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
TROAP-203ENST00000546735 RPL23AP62750 156 aaKnown RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 DMKNQ6E0U4 476 aaPredicted RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 SLC16A12Q6ZSM3 486 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 SLC35E3Q7Z769 313 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 CHPT1Q8WUD6 406 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 MUL1Q969V5 352 aa11.3□□□□□ -0.6
TROAP-203ENST00000546735 EAF1Q96JC9 268 aaPredicted RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 DIMT1Q9UNQ2 313 aaKnown RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 EXOSC1Q9Y3B2 195 aaKnown RBP11.3□□□□□ -0.6
TROAP-203ENST00000546735 PNMA8CA0A1B0GUJ8 204 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
TROAP-203ENST00000546735 NUDT19A8MXV4 375 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
TROAP-203ENST00000546735 MT-ND4P03905 459 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
TROAP-203ENST00000546735 GTF2F2P13984 249 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 MYL12AP19105 171 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 GZMHP20718 246 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 THBS3P49746 956 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 ZNF497Q6ZNH5 498 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 OR2W3Q7Z3T1 314 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 GGHQ92820 318 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 TMEM80Q96HE8 168 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 PGLYRP3Q96LB9 341 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 RDH12Q96NR8 316 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 DUX3Q96PT4 197 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 OR14A2Q96R54 314 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
TROAP-203ENST00000546735 IRGMA1A4Y4 181 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 AIPO00170 330 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
TROAP-203ENST00000546735 IGHG2P01859 326 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 EBI3Q14213 229 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 Q499Y3 187 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 GLIPR1L1Q6UWM5 242 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 LCNL1Q6ZST4 164 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 LINC00596Q86U02 117 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 STPG2Q8N412 459 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 JAGN1Q8N5M9 183 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 LINC00311Q8N616 119 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 ZNF485Q8NCK3 441 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 OR10V1Q8NGI7 309 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 OR4K15Q8NH41 348 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 BANF2Q9H503 90 aa11.28□□□□□ -0.6
TROAP-203ENST00000546735 PAK1IP1Q9NWT1 392 aaPredicted RBP11.28□□□□□ -0.6
TROAP-203ENST00000546735 CHCHD3Q9NX63 227 aaKnown RBP11.28□□□□□ -0.6
TROAP-203ENST00000546735 MRPS28Q9Y2Q9 187 aaKnown RBP11.28□□□□□ -0.6
TROAP-203ENST00000546735 TRBV5-7A0A0A0MS05 114 aa11.27□□□□□ -0.61
TROAP-203ENST00000546735 EBAG9O00559 213 aa11.27□□□□□ -0.61
TROAP-203ENST00000546735 ORC5O43913 435 aa11.27□□□□□ -0.61
TROAP-203ENST00000546735 ZNF780AO75290 641 aaPredicted RBP11.27□□□□□ -0.61
TROAP-203ENST00000546735 GPX5O75715 221 aa11.27□□□□□ -0.61
TROAP-203ENST00000546735 MAS1P04201 325 aa11.27□□□□□ -0.61
TROAP-203ENST00000546735 VHLP40337 213 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms