RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 RSBN1Q5VWQ0 802 aaPredicted RBP9.83□□□□□ -0.84
SCAF11-208ENST00000546534 NXNL2Q5VZ03 156 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 SAXO1Q8IYX7 474 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 ADGRG5Q8IZF4 528 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 PLPPR1Q8TBJ4 325 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 RTN4IP1Q8WWV3 396 aaPredicted RBP9.83□□□□□ -0.84
SCAF11-208ENST00000546534 ARPC1AQ92747 370 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 CHCHD6Q9BRQ6 235 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 RSRP1Q9BUV0 290 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 BARHL1Q9BZE3 327 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 OR51J1Q9H342 316 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 GHITMQ9H3K2 345 aa9.83□□□□□ -0.84
SCAF11-208ENST00000546534 ARGLU1Q9NWB6 273 aaPredicted RBP9.83□□□□□ -0.84
SCAF11-208ENST00000546534 ZNF107Q9UII5 783 aaPredicted RBP9.83□□□□□ -0.84
SCAF11-208ENST00000546534 A8MZ25 164 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 LINC01619G3V211 115 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 SULT1C4O75897 302 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 IGLV1-40P01703 118 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 OCM2P0CE71 109 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 OCMP0CE72 109 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-208ENST00000546534 SLC2A2P11168 524 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-208ENST00000546534 RAB9AP51151 201 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 EFNB1P98172 346 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 HAGHQ16775 308 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 HAPLN4Q86UW8 402 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 LYPD6Q86Y78 171 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 TCEANCQ8N8B7 351 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 OR13C9Q8NGT0 318 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 CNIH3Q8TBE1 160 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 TMEM163Q8TC26 289 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 NR1H4Q96RI1 486 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-208ENST00000546534 FAM107BQ9H098 131 aa9.82□□□□□ -0.84
SCAF11-208ENST00000546534 CHCHD3Q9NX63 227 aaKnown RBP9.82□□□□□ -0.84
SCAF11-208ENST00000546534 FAM90A10PA6NDY2 464 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 SNX3O60493 162 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 APOL3O95236 402 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 MT-ND2P03891 347 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 OR8U9P0C7N5 309 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 OR2T7P0C7T2 308 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 TMEM225BP0DP42 221 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 MNAT1P51948 309 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 TMEM244Q5VVB8 128 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 SGPP2Q8IWX5 399 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 CANT1Q8WVQ1 401 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 OR4C12Q96R67 309 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 MBOAT4Q96T53 435 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 TPSG1Q9NRR2 321 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 MYRFQ9Y2G1 1151 aa9.81□□□□□ -0.84
SCAF11-208ENST00000546534 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 IFNA6P05013 189 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 DBTP11182 482 aaKnown RBP9.8□□□□□ -0.84
SCAF11-208ENST00000546534 PAX5Q02548 391 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 GALEQ14376 348 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 TP53I3Q53FA7 332 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 FDX2Q6P4F2 183 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 GID4Q8IVV7 300 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 ARHGAP24Q8N264 748 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 OR10H4Q8NGA5 316 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 OR10AC1Q8NH08 325 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 UBALD1Q8TB05 177 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 UTP4Q969X6 686 aaKnown RBP9.8□□□□□ -0.84
SCAF11-208ENST00000546534 LRGUKQ96M69 825 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 IL4I1Q96RQ9 567 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 SSBP4Q9BWG4 385 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-208ENST00000546534 PRRG3Q9BZD7 231 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 TOLLIPQ9H0E2 274 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 ZCCHC4Q9H5U6 513 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 FAM118AQ9NWS6 357 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 GNG8Q9UK08 70 aa9.8□□□□□ -0.84
SCAF11-208ENST00000546534 IGHV4OR15-8A0A075B7B6 117 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 A0A087WW49 117 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 IGHV3-43A0A0B4J1X8 118 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 B2RBV5 119 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 C15orf65H3BRN8 121 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 SDCBPO00560 298 aaPredicted RBP9.79□□□□□ -0.84
SCAF11-208ENST00000546534 HSPA12AO43301 675 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 IGHV3-43DP0DP04 118 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 GZMHP20718 246 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 IL3RAP26951 378 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 VHLP40337 213 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 MTNR1BP49286 362 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 DAPP51397 102 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 PITPNAQ00169 270 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 MMDQ15546 238 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 ELP2Q6IA86 826 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 C8orf31Q8N9H6 132 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 MINDY2Q8NBR6 621 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 OR51A4Q8NGJ6 313 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 OR52M1Q8NGK5 317 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 OR2G2Q8NGZ5 317 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 IL17DQ8TAD2 202 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 DNAJC9Q8WXX5 260 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 EME1Q96AY2 570 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
SCAF11-208ENST00000546534 PARP11Q9NR21 331 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 ZNF581Q9P0T4 197 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 KIAA1456Q9P272 454 aa9.79□□□□□ -0.84
SCAF11-208ENST00000546534 WARS2Q9UGM6 360 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms