RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 OR10R2Q8NGX6 335 aa16.71■□□□□ 0.27
HMGA2-211ENST00000545998 OR4K15Q8NH41 348 aa16.71■□□□□ 0.27
HMGA2-211ENST00000545998 MRPL30Q8TCC3 161 aaKnown RBP16.71■□□□□ 0.27
HMGA2-211ENST00000545998 RAB2BQ8WUD1 216 aa16.71■□□□□ 0.27
HMGA2-211ENST00000545998 BCL7BQ9BQE9 202 aa16.71■□□□□ 0.27
HMGA2-211ENST00000545998 ATG5Q9H1Y0 275 aa16.71■□□□□ 0.27
HMGA2-211ENST00000545998 DCSTAMPQ9H295 470 aa16.71■□□□□ 0.27
HMGA2-211ENST00000545998 NPIPB11E5RHQ5 1161 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 SSTR5P35346 364 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 GDNFP39905 211 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 RIPPLY3P57055 190 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 PRIMA1Q86XR5 153 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 PNKDQ8N490 385 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 OR13D1Q8NGV5 346 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 SLC25A38Q96DW6 304 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 RAB3CQ96E17 227 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 RHBDL2Q9NX52 303 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 AK3Q9UIJ7 227 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 TRAPPC2LQ9UL33 140 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 SPATA2Q9UM82 520 aa16.7■□□□□ 0.26
HMGA2-211ENST00000545998 A0A1W2PRD5 423 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 A0A1W2PRF3 423 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 A0A1W2PRM7 423 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 C15orf65H3BRN8 121 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 NPFFO15130 113 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 NAPSAO96009 420 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 COX7A1P24310 79 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 BAIAP2L2Q6UXY1 529 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 TMEM133Q9H2Q1 129 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 OCEL1Q9H607 264 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 MBNL3Q9NUK0 354 aaKnown RBP16.69■□□□□ 0.26
HMGA2-211ENST00000545998 KCNK7Q9Y2U2 307 aa16.69■□□□□ 0.26
HMGA2-211ENST00000545998 ORC5O43913 435 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 IFNA2P01563 188 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 RCC1P18754 421 aaPredicted RBP16.68■□□□□ 0.26
HMGA2-211ENST00000545998 OLFML2AQ68BL7 652 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 OR52W1Q6IF63 320 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 RFESDQ8TAC1 157 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 KCTD12Q96CX2 325 aaKnown RBP16.68■□□□□ 0.26
HMGA2-211ENST00000545998 KIRREL1Q96J84 757 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 ZNF48Q96MX3 618 aaPredicted RBP16.68■□□□□ 0.26
HMGA2-211ENST00000545998 SUCNR1Q9BXA5 334 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 IDI2-AS1Q9NZ38 188 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 IGHV2-26A0A0B4J1V2 119 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 GNB3P16520 340 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 RORCP51449 518 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 SPCS2Q15005 226 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 MIDNQ504T8 468 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 C6orf183Q5T699 404 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 Q6ZPA2 131 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 OR11H6Q8NGC7 330 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 ARL11Q969Q4 196 aa16.68■□□□□ 0.26
HMGA2-211ENST00000545998 TRBV6-6A0A0A6YYG2 114 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 A0A0U1RQK1 487 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 ODF3BA8MYP8 253 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 C12orf77C9JDV5 145 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 MFNGO00587 321 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 SCGNO76038 276 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 HIST1H1DP16402 221 aaKnown RBP16.67■□□□□ 0.26
HMGA2-211ENST00000545998 SAA4P35542 130 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 DEFB112Q30KQ8 113 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 ZNF880Q6PDB4 577 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 TRAT1Q6PIZ9 186 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 OR10A7Q8NGE5 316 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 ISOC1Q96CN7 298 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 HDHD3Q9BSH5 251 aaPredicted RBP16.67■□□□□ 0.26
HMGA2-211ENST00000545998 RIMS4Q9H426 269 aaPredicted RBP16.67■□□□□ 0.26
HMGA2-211ENST00000545998 CEPT1Q9Y6K0 416 aa16.67■□□□□ 0.26
HMGA2-211ENST00000545998 A0A087X0M5 115 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 A0A1B0GX30 115 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 MEIOCA2RUB1 952 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 CD34P28906 385 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 UTF1Q5T230 341 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 ZNF626Q68DY1 528 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 ZNF554Q86TJ5 538 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 SIGLECL1Q8N7X8 197 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 ZNF418Q8TF45 676 aaPredicted RBP16.66■□□□□ 0.26
HMGA2-211ENST00000545998 AJUBAQ96IF1 538 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 CLEC7AQ9BXN2 247 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 PRDM13Q9H4Q3 707 aa16.66■□□□□ 0.26
HMGA2-211ENST00000545998 CHMP1AQ9HD42 196 aaPredicted RBP16.66■□□□□ 0.26
HMGA2-211ENST00000545998 A0A075B6Q4 140 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 MDFIC2A0A1B0GVS7 189 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 FAM172BPA6NC97 362 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 SERPINE3A8MV23 424 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 H3BMQ9 156 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 F2RL2O00254 374 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 NFYBP25208 207 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 DYNC1I2Q13409 638 aaKnown RBP16.65■□□□□ 0.26
HMGA2-211ENST00000545998 ABHD12Q8N2K0 398 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 UBALD1Q8TB05 177 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 CMSS1Q9BQ75 279 aaKnown RBP16.65■□□□□ 0.26
HMGA2-211ENST00000545998 ABCG5Q9H222 651 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 ZMAT3Q9HA38 289 aaKnown RBP16.65■□□□□ 0.26
HMGA2-211ENST00000545998 TAF9BQ9HBM6 251 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 ZNF286AQ9HBT8 521 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 C12orf4Q9NQ89 552 aa16.65■□□□□ 0.26
HMGA2-211ENST00000545998 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMGA2-211ENST00000545998 FBN1P35555 2871 aaKnown RBP16.65■□□□□ 0.26
HMGA2-211ENST00000545998 POM121CA8CG34 1229 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms