RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MYDGFQ969H8 173 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 S100A13Q99584 98 aa16.78■□□□□ 0.28
SCARB1-210ENST00000545493 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.78■□□□□ 0.28
SCARB1-210ENST00000545493 RCC2Q9P258 522 aaKnown RBP16.78■□□□□ 0.28
SCARB1-210ENST00000545493 ZNF780AO75290 641 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-210ENST00000545493 FAM106CPP0CH98 169 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 CAPGP40121 348 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 RAB7AP51149 207 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 MED21Q13503 144 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 C9orf152Q5JTZ5 239 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 ATAD3CQ5T2N8 411 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 FAM53AQ6NSI3 398 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-210ENST00000545493 CENPVQ7Z7K6 275 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-210ENST00000545493 THNSL2Q86YJ6 484 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 FBLIM1Q8WUP2 373 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 MUL1Q969V5 352 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 PHF21AQ96BD5 680 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 CYYR1Q96J86 154 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 PAK1IP1Q9NWT1 392 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-210ENST00000545493 CHCHD3Q9NX63 227 aaKnown RBP16.77■□□□□ 0.28
SCARB1-210ENST00000545493 CNOT2Q9NZN8 540 aaKnown RBP16.77■□□□□ 0.28
SCARB1-210ENST00000545493 CKLFQ9UBR5 152 aa16.77■□□□□ 0.28
SCARB1-210ENST00000545493 A0A1W2PPK0 400 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 EFCAB10A6NFE3 127 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 HSD17B6O14756 317 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 GTF2F2P13984 249 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 OGFRL1Q5TC84 451 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-210ENST00000545493 ZNF497Q6ZNH5 498 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 Q6ZPA2 131 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 SLC16A12Q6ZSM3 486 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 AHSA2Q719I0 299 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 LYPD6Q86Y78 171 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 OR8H3Q8N146 312 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 C5orf56Q8N8D9 126 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 OR4X2Q8NGF9 303 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 OR10X1Q8NGY0 326 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 DERL3Q96Q80 235 aa16.76■□□□□ 0.27
SCARB1-210ENST00000545493 MRPS28Q9Y2Q9 187 aaKnown RBP16.76■□□□□ 0.27
SCARB1-210ENST00000545493 TSSC4Q9Y5U2 329 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-210ENST00000545493 TCRBV4S1A1TA0A5B7 111 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 PIN1P1O15428 100 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 IGKV1D-33P01593 117 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 IGKV1-33P01594 117 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 PF4V1P10720 104 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 TMEM11P17152 192 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 TAS2R43P59537 309 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 ZNF816Q0VGE8 651 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-210ENST00000545493 HES1Q14469 280 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 GLIPR1L1Q6UWM5 242 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 C8orf59Q8N0T1 100 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-210ENST00000545493 JAGN1Q8N5M9 183 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 CCDC107Q8WV48 283 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 ARL11Q969Q4 196 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 PSORS1C1Q9UIG5 152 aa16.75■□□□□ 0.27
SCARB1-210ENST00000545493 IGHV3-43A0A0B4J1X8 118 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 MYL12BO14950 172 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 CASQ2O14958 399 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-210ENST00000545493 IGHV3-43DP0DP04 118 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 REG1BP48304 166 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 WNT4P56705 351 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 LOXL3P58215 753 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 AWAT2Q6E213 333 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 NEK7Q8TDX7 302 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 AURKAIP1Q9NWT8 199 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-210ENST00000545493 GFOD1Q9NXC2 390 aa16.74■□□□□ 0.27
SCARB1-210ENST00000545493 IGHV1-3A0A0C4DH29 117 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 C12orf77C9JDV5 145 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 AIPO00170 330 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 SDCBPO00560 298 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-210ENST00000545493 FGF16O43320 207 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 MT-ND4P03905 459 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 MAS1P04201 325 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 KHDC1LQ5JSQ8 128 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 REC114Q7Z4M0 266 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 LINC00311Q8N616 119 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 WFDC9Q8NEX5 89 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 OR52M1Q8NGK5 317 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 PLCXD1Q9NUJ7 323 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 NECAP2Q9NVZ3 263 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 FKBP14Q9NWM8 211 aa16.73■□□□□ 0.27
SCARB1-210ENST00000545493 CCRL2O00421 344 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 SLC31A2O15432 143 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 ORC5O43913 435 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 CD1AP06126 327 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 IGLL1P15814 213 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 CELP19835 753 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 CD33P20138 364 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 GZMHP20718 246 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 GPR176Q14439 515 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 HNF4GQ14541 408 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 IZUMO1Q8IYV9 350 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 GAPTQ8N292 157 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 STX19Q8N4C7 294 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 C8orf31Q8N9H6 132 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 TMEM104Q8NE00 496 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 NOL4LQ96MY1 436 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-210ENST00000545493 BANF2Q9H503 90 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 SPACA1Q9HBV2 294 aa16.72■□□□□ 0.27
SCARB1-210ENST00000545493 IGHV3-72A0A0B4J1Y9 119 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 PSMB11A5LHX3 300 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms