RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 RAC3P60763 192 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 RPS23P62266 143 aaKnown RBP11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 FAM27BQ5VT28 67 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 PNRC2Q9NPJ4 139 aaKnown RBP11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 ABI3Q9P2A4 366 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 SPTBN1Q01082 2364 aaKnown RBP11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 IGHV3-43A0A0B4J1X8 118 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 CD5P06127 495 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 IGHV3-43DP0DP04 118 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 RAB4BP61018 213 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 UBE2NP61088 152 aaKnown RBP11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 HLA-DRB3P79483 266 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 GCNT2Q8N0V5 402 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 CLDN23Q96B33 292 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 APH1AQ96BI3 265 aa11.42□□□□□ -0.58
PCMTD1-208ENST00000544451 MMP7P09237 267 aaPredicted RBP11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 EPHA8P29322 1005 aaPredicted RBP11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 CHRNA7P36544 502 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 ZNF66Q6ZN08 573 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 NTNG2Q96CW9 530 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 GGACTQ9BVM4 153 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 CDH20Q9HBT6 801 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 PQLC2LA1A4F0 135 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 PPP5D1E7EU14 171 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 VDAC1P21796 283 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 BTNL3Q6UXE8 466 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 DTX1Q86Y01 620 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 SPEM1Q8N4L4 309 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 TPRX1Q8N7U7 411 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 OR10V1Q8NGI7 309 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 TMEM204Q9BSN7 226 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 USF3Q68DE3 2245 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 PGA5P0DJD9 388 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 CLN3Q13286 438 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 BOD1Q96IK1 185 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 HES7Q9BYE0 225 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 HS3ST3B1Q9Y662 390 aa11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 SPTBN5Q9NRC6 3674 aaKnown RBP11.41□□□□□ -0.58
PCMTD1-208ENST00000544451 IGKV1D-13A0A0B4J2D9 117 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 A0A1W2PPV4 95 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 IGKV1-13P0DP09 117 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 DTYMKP23919 212 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 NCR3LG1Q68D85 454 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 BOKQ9UMX3 212 aaPredicted RBP11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 PROB1E7EW31 1015 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 LAMTOR5O43504 91 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 RPS2P15880 293 aaKnown RBP11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 CEACAM6P40199 344 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 VHLLQ6RSH7 139 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 TMEM222Q9H0R3 208 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 GPR35Q9HC97 309 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 FKBP2P26885 142 aaKnown RBP11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 HGFACQ04756 655 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 SRSF4Q08170 494 aaKnown RBP11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 DCAF12Q5T6F0 453 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 MOB3AQ96BX8 217 aa11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 PATZ1Q9HBE1 687 aaKnown RBP11.4□□□□□ -0.58
PCMTD1-208ENST00000544451 SPTAN1Q13813 2472 aaKnown RBP11.4□□□□□ -0.59
PCMTD1-208ENST00000544451 ZIC3O60481 467 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 EGR1P18146 543 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 SUCLG1P53597 346 aaKnown RBP11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 ALKBH6Q3KRA9 238 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 HIKESHIQ53FT3 197 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 TMEM164Q5U3C3 297 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 CLDN34H7C241 214 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 PSMB3P49720 205 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 SPNS3Q6ZMD2 512 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 DMBX1Q8NFW5 382 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 MAFAQ8NHW3 353 aaPredicted RBP11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 Q8WTZ3 238 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 OR1A1Q9P1Q5 309 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 CRYAAP02489 173 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 DEFA4P12838 97 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 CEBPDP49716 269 aaPredicted RBP11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 FOXG1P55316 489 aaPredicted RBP11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 CA5BP1Q8WTZ4 195 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 MALSU1Q96EH3 234 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 OR51M1Q9H341 326 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 AKAP6Q13023 2319 aa11.39□□□□□ -0.59
PCMTD1-208ENST00000544451 HEATR1Q9H583 2144 aaKnown RBP11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 C5orf52A6NGY3 159 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 SPINK4O60575 86 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 OR8U8P0C7N1 319 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 DUSP13Q9UII6 198 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 EML6Q6ZMW3 1958 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 CDIPTO14735 213 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 ZNF737O75373 536 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 CDS2O95674 445 aa11.38□□□□□ -0.59
PCMTD1-208ENST00000544451 G0S2P27469 103 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms