RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GFRA1P56159 465 aa13.56□□□□□ -0.24
CHD4-210ENST00000544040 CGB1A6NKQ9 187 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 KIR2DL1P43626 348 aaPredicted RBP13.55□□□□□ -0.24
CHD4-210ENST00000544040 KIR2DL2P43627 348 aaPredicted RBP13.55□□□□□ -0.24
CHD4-210ENST00000544040 FAM216AQ8WUB2 273 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 LPAR2Q9HBW0 351 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 MPC1Q9Y5U8 109 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 RICTORQ6R327 1708 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 EFNB2P52799 333 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 AESQ08117 197 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 DEFB124Q8NES8 71 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 SMOC1Q9H4F8 434 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 FFAR1O14842 300 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 PEX11BO96011 259 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 MPLP40238 635 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 SPEM1Q8N4L4 309 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 ATP6V0CP27449 155 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 FAM74A3Q4VXF1 159 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 ZNF385CQ66K41 422 aaPredicted RBP13.55□□□□□ -0.24
CHD4-210ENST00000544040 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 OGG1O15527 345 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 HOXA4Q00056 320 aaPredicted RBP13.55□□□□□ -0.24
CHD4-210ENST00000544040 KLF9Q13886 244 aaPredicted RBP13.55□□□□□ -0.24
CHD4-210ENST00000544040 TEPPQ6URK8 271 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 DYNLRB2Q8TF09 96 aa13.55□□□□□ -0.24
CHD4-210ENST00000544040 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 VDAC1P21796 283 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 TFPI2P48307 235 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 HYAL1Q12794 435 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 ANKRD33Q7Z3H0 272 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 OR6X1Q8NH79 312 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 RTN4RQ9BZR6 473 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 PARP11Q9NR21 331 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 TRAV8-7A0A075B6U6 113 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 RUNX1Q01196 453 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 NSUN5P2Q63ZY6 315 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 CYB561D1Q8N8Q1 229 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 FLRT3Q9NZU0 649 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 INSIG2Q9Y5U4 225 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 EMP1P54849 157 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 CD81P60033 236 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 HIKESHIQ53FT3 197 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 ZNHIT1O43257 154 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 SSPNQ14714 243 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 COX19Q49B96 90 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 RAB1CQ92928 201 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 MAGEA5P43359 124 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 HMGA2P52926 109 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 MFAP2P55001 183 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
CHD4-210ENST00000544040 CDX4O14627 284 aaPredicted RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 PRSS8Q16651 343 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 K7ERU9 68 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 SRD5A2P31213 254 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 EIF3IQ13347 325 aaKnown RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 CLPPQ16740 277 aaPredicted RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 PTPMT1Q8WUK0 201 aaPredicted RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 FAM3BP58499 235 aaPredicted RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 SURF2Q15527 256 aaPredicted RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 WNT2BQ93097 391 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 P2RX4Q99571 388 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 TMEM38BQ9NVV0 291 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 KLK13Q9UKR3 277 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 TRGC2P03986 189 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 CD3EP07766 207 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 BRS3P32247 399 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 GUCA2BQ16661 112 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 FAM209AQ5JX71 171 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
CHD4-210ENST00000544040 IGHV1OR21-1A0A087WYE8 117 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 IL11RAQ14626 422 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 SAP30LQ9HAJ7 183 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 IL36RNQ9UBH0 155 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 HIGD1AQ9Y241 93 aa13.53□□□□□ -0.24
CHD4-210ENST00000544040 KRTCAP3Q53RY4 240 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 ZNF738Q8NE65 137 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 ZNF488Q96MN9 340 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 PRNDQ9UKY0 176 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 CTXND1A0A1B0GTU2 59 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 PLA2G10O15496 165 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 FABP2P12104 132 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 HOXA6P31267 233 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 ROM1Q03395 351 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 ZNF519Q8TB69 540 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 PTP4A1Q93096 173 aa13.52□□□□□ -0.24
CHD4-210ENST00000544040 LINC00862A6NCI5 91 aa13.52□□□□□ -0.25
CHD4-210ENST00000544040 FAM74A7A6NL05 159 aa13.52□□□□□ -0.25
CHD4-210ENST00000544040 MUC1P15941 1255 aaPredicted RBP13.52□□□□□ -0.25
CHD4-210ENST00000544040 HRKO00198 91 aa13.52□□□□□ -0.25
CHD4-210ENST00000544040 PPP1CCP36873 323 aaKnown RBP13.52□□□□□ -0.25
CHD4-210ENST00000544040 RPP25Q9BUL9 199 aaKnown RBP13.52□□□□□ -0.25
CHD4-210ENST00000544040 FAM60AQ9NP50 221 aa13.52□□□□□ -0.25
CHD4-210ENST00000544040 ZNF784Q8NCA9 323 aaPredicted RBP13.52□□□□□ -0.25
CHD4-210ENST00000544040 OR8G5Q8NG78 346 aa13.52□□□□□ -0.25
CHD4-210ENST00000544040 ALG14Q96F25 216 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms