RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 M0QZ24 198 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 C9orf40Q8IXQ3 194 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 D2HGDHQ8N465 521 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 MAP1LC3BQ9GZQ8 125 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 TMEM222Q9H0R3 208 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 C11orf1Q9H5F2 150 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 ZNF442Q9H7R0 627 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 OR6C3Q9NZP0 311 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 TRAPPC1Q9Y5R8 145 aa10.94□□□□□ -0.66
SMG8-202ENST00000543872 HRASP01112 189 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 PDGFBP01127 241 aaPredicted RBP10.93□□□□□ -0.66
SMG8-202ENST00000543872 IAPPP10997 89 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 SELENOTP62341 195 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 HIST1H3AP68431 136 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 SHHQ15465 462 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 FAM78BQ5VT40 261 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 SHISA6Q6ZSJ9 500 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 SELENOHQ8IZQ5 122 aaKnown RBP10.93□□□□□ -0.66
SMG8-202ENST00000543872 LYG1Q8N1E2 194 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 VN1R17PQ8TDU5 208 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 ALKBH7Q9BT30 221 aaPredicted RBP10.93□□□□□ -0.66
SMG8-202ENST00000543872 TUBG2Q9NRH3 451 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 SLC39A9Q9NUM3 307 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 A0A1W2PNR3 127 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 TMEM238C9JI98 176 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 PPYP01298 95 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 IFNA1P01562 189 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 GCH1P30793 250 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 OR4F5Q8NH21 305 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 SSC4DQ8WTU2 575 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 TMEM234Q8WY98 164 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 MOB3AQ96BX8 217 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 OR4F4Q96R69 305 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 PYGO2Q9BRQ0 406 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 RNF150Q9ULK6 438 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 RNF24Q9Y225 148 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 TSPAN2O60636 221 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 PDLIM4P50479 330 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 IL24Q13007 206 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 MYBPHQ13203 477 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 NSDHLQ15738 373 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 COL5A1-AS1Q5SY13 56 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 Q6ZVH6 145 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 MRGPRGQ86SM5 289 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 TGIF2LYQ8IUE0 185 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 ZNF784Q8NCA9 323 aaPredicted RBP10.93□□□□□ -0.66
SMG8-202ENST00000543872 MIEN1Q9BRT3 115 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 KLHL13Q9P2N7 655 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 B3GAT1Q9P2W7 334 aa10.93□□□□□ -0.66
SMG8-202ENST00000543872 IGHG1P01857 330 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 EXT1Q16394 746 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 ACTL10Q5JWF8 245 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 OR2AE1Q8NHA4 323 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 OR2V1Q8NHB1 315 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 ZNF721Q8TF20 911 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 GATAD1Q8WUU5 269 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 SLC7A10Q9NS82 523 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 LILRA1O75019 489 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 GUCA1AP43080 201 aaPredicted RBP10.92□□□□□ -0.66
SMG8-202ENST00000543872 Q6ZSR6 202 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 CYP2G1PQ6ZSU1 146 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 ZCCHC14Q8WYQ9 949 aaKnown RBP10.92□□□□□ -0.66
SMG8-202ENST00000543872 WNT16Q9UBV4 365 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 WDR87Q6ZQQ6 2873 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 IGHV3-20A0A0C4DH32 117 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 H3BMH7 237 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 BMP5P22003 454 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 MDH2P40926 338 aaKnown RBP10.92□□□□□ -0.66
SMG8-202ENST00000543872 BAXQ07812 192 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 KMT5CQ86Y97 462 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 PLPPR1Q8TBJ4 325 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 PARLQ9H300 379 aa10.92□□□□□ -0.66
SMG8-202ENST00000543872 DHRS3O75911 302 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 UMODP07911 640 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 CD46P15529 392 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 HNRNPA2B1P22626 353 aaKnown RBP10.91□□□□□ -0.66
SMG8-202ENST00000543872 ZP4Q12836 540 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 ATP6V1FQ16864 119 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 YAF2Q8IY57 180 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 GAPTQ8N292 157 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 VAMP8Q9BV40 100 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 MANBALQ9NQG1 85 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 YLPM1P49750 1951 aaKnown RBP10.91□□□□□ -0.66
SMG8-202ENST00000543872 VSTM2BA6NLU5 285 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 OR7C1O76099 320 aaPredicted RBP10.91□□□□□ -0.66
SMG8-202ENST00000543872 EGR1P18146 543 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 PAX9P55771 341 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 MEF2BQ02080 365 aaPredicted RBP10.91□□□□□ -0.66
SMG8-202ENST00000543872 MMDQ15546 238 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 TCF23Q7RTU1 214 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 MRPL30Q8TCC3 161 aaKnown RBP10.91□□□□□ -0.66
SMG8-202ENST00000543872 FGF14Q92915 247 aa10.91□□□□□ -0.66
SMG8-202ENST00000543872 KBTBD11O94819 623 aa10.9□□□□□ -0.66
SMG8-202ENST00000543872 GYPAP02724 150 aa10.9□□□□□ -0.66
SMG8-202ENST00000543872 HOXC12P31275 282 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms