RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 A0A0G2JMZ2 1700 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 LRRC37A2A6NM11 1700 aa6.86□□□□□ -1.31
VPS13D-211ENST00000543710 A0A1B0GTH9 108 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 LOC390937A0A1W2PQ73 354 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 HSPB6O14558 160 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 EREGO14944 169 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 HPRT1P00492 218 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 SAMD13Q5VXD3 122 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 TMEM123Q8N131 208 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR10G3Q8NGC4 313 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 VSTM2LQ96N03 204 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 CNTD2Q9H8S5 307 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 SLC7A10Q9NS82 523 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 PPM1DO15297 605 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 DYNLT3P51808 116 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 ZNF645Q8N7E2 425 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR5R1Q8NH85 324 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR2W1Q9Y3N9 320 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 IGHV3-20A0A0C4DH32 117 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 SYNGR2O43760 224 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 HSBP1O75506 76 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 PLPPR5Q32ZL2 321 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 PWWP2BQ6NUJ5 590 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 LRP11Q86VZ4 500 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 CALHM1Q8IU99 346 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR10AD1Q8NGE0 317 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 GGACTQ9BVM4 153 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR2H1Q9GZK4 316 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 TINAGL1Q9GZM7 467 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-211ENST00000543710 GP6Q9HCN6 339 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 MRPS16Q9Y3D3 137 aaKnown RBP6.85□□□□□ -1.31
VPS13D-211ENST00000543710 SIP14410 1827 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 MFSD2BA6NFX1 497 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 ZNF785A8K8V0 405 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 P2RY6Q15077 328 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 BSXQ3C1V8 233 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 MESTQ5EB52 335 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR10G8Q8NGN5 311 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 OR5C1Q8NGR4 320 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 R3HDM4Q96D70 268 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 SMIM14Q96QK8 99 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 LPAR2Q9HBW0 351 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 A0A0U1RQS6 177 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 RAB29O14966 203 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 AMY1AP04745 511 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 LIMS1P48059 325 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 TNFAIP6P98066 277 aaPredicted RBP6.85□□□□□ -1.31
VPS13D-211ENST00000543710 PAX5Q02548 391 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 VAMP3Q15836 100 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 CEACAM16Q2WEN9 425 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 ST6GALNAC3Q8NDV1 305 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 SLC25A28Q96A46 364 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 ORAI1Q96D31 301 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 MS4A10Q96PG2 267 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 ZNF835Q9Y2P0 537 aa6.85□□□□□ -1.31
VPS13D-211ENST00000543710 PQLC2LA1A4F0 135 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 DNASE2O00115 360 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 FCMRO60667 390 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR8B12Q8NGG6 310 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR52B4Q8NGK2 314 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR5M1Q8NGP8 315 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR1L3Q8NH93 324 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 RPEQ96AT9 228 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 AQP10Q96PS8 301 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 VN1R1Q9GZP7 353 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 PRSS50Q9UI38 385 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 TRBV5-7A0A0A0MS05 114 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 E9PLN8 166 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 APCSP02743 223 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR3A4PP47883 348 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 MMP16P51512 607 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 EWSR1Q01844 656 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 DUSP2Q05923 314 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 EIF4EBP2Q13542 120 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 Q56UQ5 140 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 FAM209BQ5JX69 171 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 CD200R1LQ6Q8B3 271 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 CLEC18BQ6UXF7 455 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 C1orf162Q8NEQ5 155 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR4B1Q8NGF8 309 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 AQP3Q92482 292 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 MARS2Q96GW9 593 aaKnown RBP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 VKORC1Q9BQB6 163 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 C20orf24Q9BUV8 137 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 M0R1X1 148 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 SLC25A16P16260 332 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 MPGP29372 298 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 C10orf113Q5VZT2 155 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 KLK11Q9UBX7 282 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 SPRY1O43609 319 aaPredicted RBP6.84□□□□□ -1.31
VPS13D-211ENST00000543710 FAM27D1Q5T7N8 215 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR5AS1Q8N127 324 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 OR2V2Q96R30 315 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 MIXL1Q9H2W2 232 aa6.84□□□□□ -1.31
VPS13D-211ENST00000543710 ADAMTSL1Q8N6G6 1762 aa6.84□□□□□ -1.32
VPS13D-211ENST00000543710 NUPL2O15504 423 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms