RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 KCTD12Q96CX2 325 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-203ENST00000543002 RAB3CQ96E17 227 aa13.97□□□□□ -0.17
RABGGTA-203ENST00000543002 RHBDL2Q9NX52 303 aa13.97□□□□□ -0.17
RABGGTA-203ENST00000543002 NPIPB11E5RHQ5 1161 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 ORC5O43913 435 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 SCGNO76038 276 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 SSTR5P35346 364 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 GDNFP39905 211 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 RORCP51449 518 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 OR52W1Q6IF63 320 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 OR13D1Q8NGV5 346 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 SLC25A38Q96DW6 304 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 RIMS4Q9H426 269 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 MBNL3Q9NUK0 354 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 AK3Q9UIJ7 227 aa13.96□□□□□ -0.17
RABGGTA-203ENST00000543002 C15orf65H3BRN8 121 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 NPFFO15130 113 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 NAPSAO96009 420 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 IFNA2P01563 188 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 HIST1H1DP16402 221 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 OMGP23515 440 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 COX7A1P24310 79 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 RIPPLY3P57055 190 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 C6orf183Q5T699 404 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 TRAT1Q6PIZ9 186 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 PNKDQ8N490 385 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 OR11H6Q8NGC7 330 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 OR10A7Q8NGE5 316 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 ARL11Q969Q4 196 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 KIRREL1Q96J84 757 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 SLC6A7Q99884 636 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 TMEM133Q9H2Q1 129 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 OCEL1Q9H607 264 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 IDI2-AS1Q9NZ38 188 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 KCNK7Q9Y2U2 307 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 SOX21Q9Y651 276 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 JMJD1CQ15652 2540 aa13.95□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 MFNGO00587 321 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 NOL3O60936 208 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 RCC1P18754 421 aaPredicted RBP13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 DYNC1I2Q13409 638 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 SPCS2Q15005 226 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 ARL6IP1Q15041 203 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 MIDNQ504T8 468 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 OLFML2AQ68BL7 652 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF554Q86TJ5 538 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 RFESDQ8TAC1 157 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 ISOC1Q96CN7 298 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 CMSS1Q9BQ75 279 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 SUCNR1Q9BXA5 334 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 RAB9BQ9NP90 201 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A087X0M5 115 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 TRBV6-6A0A0A6YYG2 114 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 IGHV2-26A0A0B4J1V2 119 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A1B0GX30 115 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 POM121CA8CG34 1229 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 SERPINE3A8MV23 424 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 C12orf77C9JDV5 145 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 GNB3P16520 340 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 CD34P28906 385 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 SAA4P35542 130 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF626Q68DY1 528 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF880Q6PDB4 577 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 BAIAP2L2Q6UXY1 529 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF418Q8TF45 676 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ACOT12Q8WYK0 555 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF48Q96MX3 618 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 HDHD3Q9BSH5 251 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 CLEC7AQ9BXN2 247 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ABCG5Q9H222 651 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 CHMP1AQ9HD42 196 aaPredicted RBP13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 C12orf4Q9NQ89 552 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 KCNIP1Q9NZI2 227 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 C2CD3Q4AC94 2353 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 ZFHX3Q15911 3703 aa13.93□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A075B6Q4 140 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A0A6YYH2 397 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 A0A0U1RQK1 487 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 MEIOCA2RUB1 952 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 A6NJ64 397 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 H3BMQ9 156 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 SPINT2O43291 252 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 CD3GP09693 182 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 ZNF182P17025 639 aaPredicted RBP13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 NFYBP25208 207 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 DEFB112Q30KQ8 113 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 CDNFQ49AH0 187 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 UBE2NLQ5JXB2 153 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 Q6ZPA2 131 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 MOB1BQ7L9L4 216 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 PRIMA1Q86XR5 153 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 ABHD12Q8N2K0 398 aa13.92□□□□□ -0.18
RABGGTA-203ENST00000543002 OR52M1Q8NGK5 317 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms