RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TPST1O60507 370 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CDC40O60508 579 aaKnown RBP eCLIP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 RAD1O60671 282 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TNFSF13O75888 250 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 SNAPC5O75971 98 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 RPP14O95059 124 aaKnown RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 IFNA7P01567 189 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 HSPB1P04792 205 aaKnown RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF806P0C7X5 589 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 GIMD1P0DJR0 217 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 SMIM10L1P0DMW3 83 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 IFI30P13284 250 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PRPS1L1P21108 318 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CNR1P21554 472 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CRHBPP24387 322 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PAX6P26367 422 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TGFBR2P37173 567 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 ETV6P41212 452 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 MAP2K4P45985 399 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 RGS6P49758 472 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 XKP51811 444 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 VSX2P58304 361 aaPredicted RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PPP1CBP62140 327 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 NCS1P62166 190 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 LSM3P62310 102 aaKnown RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PRR3P79522 188 aaKnown RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PRKCDQ05655 676 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 GUCA2BQ16661 112 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 RFX4Q33E94 735 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CHRFAM7AQ494W8 412 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CDNFQ49AH0 187 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 HIGD2BQ4VC39 106 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TFDP3Q5H9I0 405 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 STEAP4Q687X5 459 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 KDM4DQ6B0I6 523 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 RPL13AP3Q6NVV1 102 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TEX261Q6UWH6 196 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM92BQ6ZTR7 304 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF329Q86UD4 541 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TMEM25Q86YD3 366 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC30A8Q8IWU4 369 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 LRRC52Q8N7C0 313 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 GDPD1Q8N9F7 314 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CCDC54Q8NEL0 328 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 OR2L5Q8NG80 312 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 OR10AD1Q8NGE0 317 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 OR8J2Q8NGG1 315 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 JOSD2Q8TAC2 188 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 UBA3Q8TBC4 463 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 DCUN1D4Q92564 292 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TMBIM1Q969X1 311 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 OTUB2Q96DC9 234 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TCEAL4Q96EI5 215 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 SMIM10Q96HG1 83 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 HYLS1Q96M11 299 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PEBP4Q96S96 227 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 PFDN5Q99471 154 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 CCDC32Q9BV29 185 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 MIXL1Q9H2W2 232 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 DSN1Q9H410 356 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM96AQ9H5X1 160 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 ACOT13Q9NPJ3 140 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 NIT2Q9NQR4 276 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TAS2R9Q9NYW1 312 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 MTFP1Q9UDX5 166 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 MOKQ9UQ07 419 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 TRAPPC4Q9Y296 219 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 UBIAD1Q9Y5Z9 338 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 F11RQ9Y624 299 aaKnown RBP2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 U3KQ87 197 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 V9GYQ6 96 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 SIPA1L1O43166 1804 aa2.88□□□□□ -1.95
SFSWAP-211ENST00000542813 MYO9BQ13459 2157 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 PLXNB2O15031 1838 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 A0A0A6YYH2 397 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 PNMA8CA0A1B0GUJ8 204 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 GNG14A0A1W2PPG7 69 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 DHRS12A0PJE2 317 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 A6NJ64 397 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 G3V2T6 193 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 KRTAP4-16G5E9R7 235 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 KLRC4-KLRK1H3BQV0 150 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 M0QZK8 103 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 FXYD1O00168 92 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 PEX7O00628 323 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 MRASO14807 208 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 CTNSO60931 367 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 MED6O75586 246 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 CNMDO75829 334 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 IGKV3-20P01619 116 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 THY1P04216 161 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 OR5AL1P0C617 328 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 TDGF1P13385 188 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 MUC1P15941 1255 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 HLA-GP17693 338 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 KDELR1P24390 212 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 MYL9P24844 172 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 G0S2P27469 103 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 HOXA9P31269 272 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms