RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ZNF266Q14584 549 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TGIF1Q15583 401 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 HMGN3Q15651 99 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 TSC22D1Q15714 1073 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 HFEQ30201 348 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF766Q5HY98 468 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SPIN3Q5JUX0 258 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 Q8IYB0 196 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 GMPPAQ96IJ6 420 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 ATP6V0BQ99437 205 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 RTL8AQ9BWD3 113 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 GLRX2Q9NS18 164 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 FAM96BQ9Y3D0 163 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 KPTNQ9Y664 436 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 LRP5LA4QPB2 252 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 ATP6V1G2-DDX39BF2Z307 99 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 LILRA1O75019 489 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 OR8U9P0C7N5 309 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 GLI4P10075 376 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 S100GP29377 79 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 ARG2P78540 354 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 BAXQ07812 192 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 FAM76BQ5HYJ3 339 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 H1FOOQ8IZA3 346 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 KDF1Q8NAX2 398 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 OR8U1Q8NH10 309 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 KIRREL1Q96J84 757 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 SLC25A31Q9H0C2 315 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 LYRM2Q9NU23 88 aaPredicted RBP5.58□□□□□ -1.52
PTPRO-208ENST00000542557 DLL3Q9NYJ7 618 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 CACFD1Q9UGQ2 172 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 OR2W1Q9Y3N9 320 aa5.58□□□□□ -1.52
PTPRO-208ENST00000542557 GPR179Q6PRD1 2367 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 SMPD2O60906 423 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 TSPAN15O95858 294 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 SLC25A6P12236 298 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF14P17017 642 aaPredicted RBP5.57□□□□□ -1.52
PTPRO-208ENST00000542557 PAX6P26367 422 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 CD80P33681 288 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 SNCAP37840 140 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 NPBWR1P48145 328 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ID3Q02535 119 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 MRPL49Q13405 166 aaKnown RBP5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF674Q2M3X9 581 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 RNFT1Q5M7Z0 435 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF324BQ6AW86 544 aaPredicted RBP5.57□□□□□ -1.52
PTPRO-208ENST00000542557 OR2T2Q6IF00 324 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 Q6P435 159 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 LFNGQ8NES3 379 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 OR8G5Q8NG78 346 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 DEFB127Q9H1M4 99 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 PLEKHF2Q9H8W4 249 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 POLDIP2Q9Y2S7 368 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 MED13Q9UHV7 2174 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF407Q9C0G0 2248 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 WDFY4Q6ZS81 3184 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ARGFXA6NJG6 315 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 HSPB6O14558 160 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ZNHIT1O43257 154 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ADAM20O43506 726 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 PGLYRP1O75594 196 aaPredicted RBP5.57□□□□□ -1.52
PTPRO-208ENST00000542557 IGHG3P01860 377 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 CA6P23280 308 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 F2RP25116 425 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 CAMLGP49069 296 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 TNFSF10P50591 281 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ERVK11-1P61568 191 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 NHLH2Q02577 135 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 TGFBR3Q03167 851 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 OR8G1Q15617 311 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 GABRA6Q16445 453 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 MIDNQ504T8 468 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 C20orf204Q6ZNR8 217 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 OR10J5Q8NHC4 309 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 SNIP1Q8TAD8 396 aaKnown RBP5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ZNF488Q96MN9 340 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 ADAT1Q9BUB4 502 aaKnown RBP5.57□□□□□ -1.52
PTPRO-208ENST00000542557 SCRT1Q9BWW7 348 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 CCL28Q9NRJ3 127 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 C19orf12Q9NSK7 152 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 CLCF1Q9UBD9 225 aa5.57□□□□□ -1.52
PTPRO-208ENST00000542557 A0A1B0GW64 132 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 IGSF23A1L1A6 192 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 UMAD1C9J7I0 102 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 H7C2Y5 167 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 K7N7A8 449 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 HSD17B6O14756 317 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 HOXB1P14653 301 aaPredicted RBP5.56□□□□□ -1.52
PTPRO-208ENST00000542557 NOVA1P51513 510 aaKnown RBP5.56□□□□□ -1.52
PTPRO-208ENST00000542557 POLR2GP62487 172 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRO-208ENST00000542557 PEA15Q15121 130 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 GUSBP1Q15486 140 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 TMEM88Q6PEY1 159 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 CLEC9AQ6UXN8 241 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 CBLN2Q8IUK8 224 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 TMEM252Q8N6L7 170 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 PLPPR1Q8TBJ4 325 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 CITED2Q99967 270 aaPredicted RBP5.56□□□□□ -1.52
PTPRO-208ENST00000542557 PRELID3BQ9Y3B1 194 aa5.56□□□□□ -1.52
PTPRO-208ENST00000542557 R4GN57 208 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms