RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 CACNA1HO95180 2353 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 IGHV3-20A0A0C4DH32 117 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 IGHV1-69-2A0A0G2JMI3 117 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 OR2T8A6NH00 312 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 WIPF1O43516 503 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 GDF9O60383 454 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 YPEL1O60688 119 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 MMP9P14780 707 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 GATA4P43694 442 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 SULT1A2P50226 295 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 MIDNQ504T8 468 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 WDR74Q6RFH5 385 aaPredicted RBP9.63□□□□□ -0.87
CDH3-203ENST00000542274 OR4D9Q8NGE8 314 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 OR6N2Q8NGY6 317 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 MFSD8Q8NHS3 518 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 YPEL2Q96QA6 119 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 ZNF391Q9UJN7 358 aa9.63□□□□□ -0.87
CDH3-203ENST00000542274 H0Y980 276 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 J3QRE1 110 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 DUS4LO95620 317 aaKnown RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 IGHA1P01876 353 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 HIST1H1CP16403 213 aaKnown RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 CFHR2P36980 270 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 PTH2RP49190 550 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 RAET1LQ5VY80 246 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 ZNF322Q6U7Q0 402 aaPredicted RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 PLXDC1Q8IUK5 500 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 OR52E2Q8NGJ4 325 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 ZMYND19Q96E35 227 aaPredicted RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 ADOQ96SZ5 270 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 PCNX3Q9H6A9 2034 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 FGF21Q9NSA1 209 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 A0A1W2PQM1 296 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 ZNF354AO60765 605 aaPredicted RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 DBHP09172 617 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 SNRPBP14678 240 aaKnown RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 RPL23AP62750 156 aaKnown RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 PLCXD2Q0VAA5 305 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 OTPQ5XKR4 325 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 ZNF101Q8IZC7 436 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 OR13C9Q8NGT0 318 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 LYPD6BQ8NI32 183 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 BLNKQ8WV28 456 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 SEH1LQ96EE3 360 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 RAX2Q96IS3 184 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 CMC2Q9NRP2 79 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 IER3IP1Q9Y5U9 82 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 A0A1B0GTI1 187 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 HYPMO75409 117 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 OTX2P32243 289 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 TMEM267Q0VDI3 215 aaPredicted RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 NR0B2Q15466 257 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 ZNF141Q15928 474 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 ZNF66Q6ZN08 573 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 P2RX4Q99571 388 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 QTRT1Q9BXR0 403 aaKnown RBP9.62□□□□□ -0.87
CDH3-203ENST00000542274 LINC00470Q9BZP3 86 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 CHST6Q9GZX3 395 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 VPREB3Q9UKI3 123 aa9.62□□□□□ -0.87
CDH3-203ENST00000542274 A0A1W2PPK0 400 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 PLPP2O43688 288 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 RCBTB2O95199 551 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 SP9P0CG40 484 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 GRPRP30550 384 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 PIGPP57054 158 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 SLC16A9Q7RTY1 509 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 OR2AE1Q8NHA4 323 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 VN1R17PQ8TDU5 208 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 DCUN1D4Q92564 292 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 ZNF775Q96BV0 537 aaPredicted RBP9.61□□□□□ -0.87
CDH3-203ENST00000542274 TSSK2Q96PF2 358 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 STRADBQ9C0K7 418 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 RAB18Q9NP72 206 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 WIPI2Q9Y4P8 454 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 IGKV1D-42A0A075B6H8 117 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 A0A087WV48 116 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
CDH3-203ENST00000542274 DAPL1A0PJW8 107 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 ACVR1BP36896 505 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 P2RX1P51575 399 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 RPS15P62841 145 aaKnown RBP9.61□□□□□ -0.87
CDH3-203ENST00000542274 GNB2P62879 340 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 FAM69BQ5VUD6 431 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 ARL9Q6T311 187 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 LINC00114Q6XXX2 140 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 CPEB2Q7Z5Q1 589 aaKnown RBP9.61□□□□□ -0.87
CDH3-203ENST00000542274 DOLPP1Q86YN1 238 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 GALNT16Q8N428 558 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 GALMQ96C23 342 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 PARP12Q9H0J9 701 aaKnown RBP9.61□□□□□ -0.87
CDH3-203ENST00000542274 ZNF160Q9HCG1 818 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 INPP5EQ9NRR6 644 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 R4GN57 208 aa9.61□□□□□ -0.87
CDH3-203ENST00000542274 B5MCH6 92 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 J3QLW9 94 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 TIAF1O95411 115 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ZNF85Q03923 595 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 GAGE5Q13069 117 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms