RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 ICAM4Q14773 271 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-208ENST00000542068 DEFB123Q8N688 67 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 RDH5Q92781 318 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 TMEM54Q969K7 222 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF665Q9H7R5 613 aa13.17□□□□□ -0.3
CNOT9-208ENST00000542068 PCNX2A6NKB5 2137 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 PPP1R2P9O14990 202 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 ELLP55199 621 aaPredicted RBP13.16□□□□□ -0.3
CNOT9-208ENST00000542068 FOXG1P55316 489 aaPredicted RBP13.16□□□□□ -0.3
CNOT9-208ENST00000542068 RAC3P60763 192 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 H3F3AP84243 136 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 SPATA46Q5T0L3 261 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 ABHD17BQ5VST6 288 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 LHFPL2Q6ZUX7 228 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 CT55Q8WUE5 264 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 SNX22Q96L94 193 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 CRIM1Q9NZV1 1036 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 HIKESHIQ53FT3 197 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 TIPARPQ7Z3E1 657 aaKnown RBP13.16□□□□□ -0.3
CNOT9-208ENST00000542068 MCEMP1Q8IX19 187 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 SELENOHQ8IZQ5 122 aaKnown RBP13.16□□□□□ -0.3
CNOT9-208ENST00000542068 OR5T1Q8NG75 326 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 TVP23CQ96ET8 276 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 VSIRQ9H7M9 311 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 WDR54Q9H977 334 aa13.16□□□□□ -0.3
CNOT9-208ENST00000542068 RBM7Q9Y580 266 aaKnown RBP13.16□□□□□ -0.3
CNOT9-208ENST00000542068 ETV2O00321 342 aaPredicted RBP13.15□□□□□ -0.3
CNOT9-208ENST00000542068 SYNGR3O43761 229 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 RNF224P0DH78 156 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 CDX1P47902 265 aaPredicted RBP13.15□□□□□ -0.3
CNOT9-208ENST00000542068 RBM11P57052 281 aaKnown RBP13.15□□□□□ -0.3
CNOT9-208ENST00000542068 Q0VFX4 171 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 GAMTQ14353 236 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 RAB35Q15286 201 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 FAM27BQ5VT28 67 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 SLC25A31Q9H0C2 315 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 DECR2Q9NUI1 292 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 A0A087WZY1 265 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
CNOT9-208ENST00000542068 OR1K1Q8NGR3 316 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 OR2V1Q8NHB1 315 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 SGCZQ96LD1 299 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 SSX3Q99909 188 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 UCP2P55851 309 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 C6orf15Q6UXA7 325 aaPredicted RBP13.15□□□□□ -0.3
CNOT9-208ENST00000542068 UNQ6494/PRO21346Q6UXR6 183 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 OR56B2PQ8NGI1 322 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 TMEM38BQ9NVV0 291 aa13.15□□□□□ -0.3
CNOT9-208ENST00000542068 IGLV3-32A0A0A0MS00 114 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 CA11O75493 328 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 METTL15P1P0C7V9 234 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 PGA5P0DJD9 388 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 KHDC3LQ587J8 217 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 FRZBQ92765 325 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 A0A0G2JRQ6 117 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 SLC34A2O95436 690 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 TRGC1P0CF51 173 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 CRYGSP22914 178 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 CD200P41217 278 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
CNOT9-208ENST00000542068 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-208ENST00000542068 PPP1R32Q7Z5V6 425 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 INTS12Q96CB8 462 aaKnown RBP13.14□□□□□ -0.31
CNOT9-208ENST00000542068 ZFHX2Q9C0A1 2572 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-208ENST00000542068 EXPH5Q8NEV8 1989 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 PITX3O75364 302 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 C1orf210Q8IVY1 113 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 LYRM2Q9NU23 88 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-208ENST00000542068 KIAA1456Q9P272 454 aa13.14□□□□□ -0.31
CNOT9-208ENST00000542068 A0A1B0GV90 55 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 GPX4P36969 197 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-208ENST00000542068 MAGEA5P43359 124 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 FUT6P51993 359 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
CNOT9-208ENST00000542068 M1APQ8TC57 530 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 FAM210BQ96KR6 192 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 SPIN2AQ99865 258 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 SPIN2BQ9BPZ2 258 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 WNT5BQ9H1J7 359 aa13.13□□□□□ -0.31
CNOT9-208ENST00000542068 UNKLQ9H9P5 680 aaKnown RBP13.13□□□□□ -0.31
CNOT9-208ENST00000542068 FOXD3Q9UJU5 478 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-208ENST00000542068 SLC22A20A6NK97 555 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms