RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 DEFA6Q01524 100 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 ZNF718Q3SXZ3 478 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 BIVMQ86UB2 503 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 RSG1Q9BU20 258 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
VARS2-212ENST00000542001 OSGIN2Q9Y236 505 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 XIRP2A4UGR9 3374 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 A0A0U1RQV5 110 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 HOXD4P09016 255 aaPredicted RBP13.93□□□□□ -0.18
VARS2-212ENST00000542001 RAB13P51153 203 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 HMGN3Q15651 99 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 FGFBP3Q8TAT2 258 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 WNT5BQ9H1J7 359 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 LAMP3Q9UQV4 416 aa13.93□□□□□ -0.18
VARS2-212ENST00000542001 UMODP07911 640 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 IGFBP3P17936 291 aaPredicted RBP13.92□□□□□ -0.18
VARS2-212ENST00000542001 MRPL13Q9BYD1 178 aaKnown RBP13.92□□□□□ -0.18
VARS2-212ENST00000542001 SLC35B3Q9H1N7 401 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 FGF7P21781 194 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 FAM3AP98173 230 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 UQCC3Q6UW78 93 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 LFNGQ8NES3 379 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 SLC25A40Q8TBP6 338 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 OR5H1A6NKK0 313 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 DVL1O14640 695 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 IL2RAP01589 272 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 FGF5P12034 268 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 TMEM37Q8WXS4 190 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 ZNF552Q9H707 407 aaPredicted RBP13.92□□□□□ -0.18
VARS2-212ENST00000542001 TAAR3PQ9P1P4 343 aa13.92□□□□□ -0.18
VARS2-212ENST00000542001 STRAPQ9Y3F4 350 aaKnown RBP13.92□□□□□ -0.18
VARS2-212ENST00000542001 A0A1W2PNV4 684 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 IFI6P09912 130 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 ZNF708P17019 499 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 NUFIP2Q7Z417 695 aaKnown RBP13.91□□□□□ -0.18
VARS2-212ENST00000542001 PPP1R32Q7Z5V6 425 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 WDFY1Q8IWB7 410 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 OR8U8P0C7N1 319 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 PRF1P14222 555 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 LIN7CQ9NUP9 197 aaKnown RBP13.91□□□□□ -0.18
VARS2-212ENST00000542001 PROCRQ9UNN8 238 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 KLK10O43240 276 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 ZNF735P0CB33 412 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 MGST1P10620 155 aaKnown RBP13.91□□□□□ -0.18
VARS2-212ENST00000542001 TRIP6Q15654 476 aaKnown RBP13.91□□□□□ -0.18
VARS2-212ENST00000542001 ZADH2Q8N4Q0 377 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 TMEM105Q8N8V8 129 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 LYZL4Q96KX0 146 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 USB1Q9BQ65 265 aaKnown RBP13.91□□□□□ -0.18
VARS2-212ENST00000542001 HIPK2Q9H2X6 1198 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 FOXJ2Q9P0K8 574 aa13.91□□□□□ -0.18
VARS2-212ENST00000542001 IGHV3OR15-7A0A075B7D8 119 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 HKR1P10072 659 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 SLC25A6P12236 298 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 VDAC1P21796 283 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 TNFSF4P23510 183 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 G6PCP35575 357 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 ZNF345Q14585 488 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 NSUN5P2Q63ZY6 315 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 TMEM204Q9BSN7 226 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 ZNF71Q9NQZ8 489 aaPredicted RBP13.9□□□□□ -0.18
VARS2-212ENST00000542001 BPTFQ12830 3046 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 CACNA1AO00555 2505 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 TFF1P04155 84 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 LRRC29Q8WV35 223 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 SARAFQ96BY9 339 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 Q96M66 194 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 RARRES2Q99969 163 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 FGF2P09038 288 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 MMP9P14780 707 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 ASPHD2Q6ICH7 369 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 TP53RKQ96S44 253 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 RIMS4Q9H426 269 aaPredicted RBP13.9□□□□□ -0.18
VARS2-212ENST00000542001 NPTNQ9Y639 398 aa13.9□□□□□ -0.18
VARS2-212ENST00000542001 MT-ND4LP03901 98 aa13.9□□□□□ -0.19
VARS2-212ENST00000542001 TIPARPQ7Z3E1 657 aaKnown RBP13.9□□□□□ -0.19
VARS2-212ENST00000542001 RTBDNQ9BSG5 229 aaPredicted RBP13.9□□□□□ -0.19
VARS2-212ENST00000542001 ZNF107Q9UII5 783 aaPredicted RBP13.9□□□□□ -0.19
VARS2-212ENST00000542001 SCGB1D1O95968 90 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 CHRNA7P36544 502 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 PMELP40967 661 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 ERVS71-1P61550 626 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 HTD2P86397 168 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 SLC38A11Q08AI6 406 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 ABHD14BQ96IU4 210 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 RFNGQ9Y644 331 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 ZNF880Q6PDB4 577 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 GLRX5Q86SX6 157 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 UBAC2Q8NBM4 344 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 ZMAT5Q9UDW3 170 aaKnown RBP13.89□□□□□ -0.19
VARS2-212ENST00000542001 NCOA6Q14686 2063 aaPredicted RBP13.89□□□□□ -0.19
VARS2-212ENST00000542001 RBFOX3A6NFN3 312 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 SYNGR2O43760 224 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 RAB5CP51148 216 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 SURF2Q15527 256 aaPredicted RBP13.89□□□□□ -0.19
VARS2-212ENST00000542001 LYG1Q8N1E2 194 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 ZNF561Q8N587 486 aa13.89□□□□□ -0.19
VARS2-212ENST00000542001 TMEM252Q8N6L7 170 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms