RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 D6RAR5 112 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 UPK2O00526 184 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 PRMT5O14744 637 aaPredicted RBP1.18□□□□□ -2.22
PRKDC-210ENST00000541488 OR2A4O95047 310 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 IGHG2P01859 326 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 PTHLHP12272 177 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 IFI30P13284 250 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 SLC6A1P30531 599 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 P2RY2P41231 377 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 GPR4P46093 362 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 TUFMP49411 452 aaKnown RBP1.18□□□□□ -2.22
PRKDC-210ENST00000541488 IFFO1Q0D2I5 559 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 PMVKQ15126 192 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 ELOCQ15369 112 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 SLC9A3R2Q15599 337 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 VAMP3Q15836 100 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 HNRNPA1L2Q32P51 320 aaKnown RBP1.18□□□□□ -2.22
PRKDC-210ENST00000541488 CLEC12AQ5QGZ9 265 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 EPGNQ6UW88 154 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 UGT2A3Q6UWM9 527 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 ASCL4Q6XD76 172 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 PAGE2Q7Z2X7 111 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 SETD3Q86TU7 594 aaPredicted RBP1.18□□□□□ -2.22
PRKDC-210ENST00000541488 ITPRIPQ8IWB1 547 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 NELFCDQ8IXH7 590 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 FAM58AQ8N1B3 248 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 CYP4Z2PQ8N1L4 340 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 RPRMLQ8N4K4 120 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 ZDHHC22Q8N966 263 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 ZNF555Q8NEP9 628 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 OR4K2Q8NGD2 314 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 OR4D6Q8NGJ1 314 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 UBA3Q8TBC4 463 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 KIAA1143Q96AT1 154 aaPredicted RBP1.18□□□□□ -2.22
PRKDC-210ENST00000541488 SMIM8Q96KF7 97 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 IGF2BP2-AS1Q96M15 143 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 OR2A7Q96R45 310 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 METTL26Q96S19 204 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 THTPAQ9BU02 230 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 TM6SF2Q9BZW4 377 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 DSN1Q9H410 356 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 PRORYQ9H606 182 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 SND1-IT1Q9HBX3 110 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 VCX3AQ9NNX9 186 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 VAPAQ9P0L0 249 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 MCTS1Q9ULC4 181 aaKnown RBP1.18□□□□□ -2.22
PRKDC-210ENST00000541488 INSIG2Q9Y5U4 225 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 V9GYY9 64 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 ABCA2Q9BZC7 2435 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 PIK3R4Q99570 1358 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 NUP205Q92621 2012 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 MGAMO43451 1857 aa1.18□□□□□ -2.22
PRKDC-210ENST00000541488 CHD7Q9P2D1 2997 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 MAP2P11137 1827 aaKnown RBP1.17□□□□□ -2.22
PRKDC-210ENST00000541488 TSC2P49815 1807 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 PHIPQ8WWQ0 1821 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 SPENQ96T58 3664 aaKnown RBP1.17□□□□□ -2.22
PRKDC-210ENST00000541488 SPG11Q96JI7 2443 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 BCL9O00512 1426 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 UBR5O95071 2799 aaPredicted RBP1.17□□□□□ -2.22
PRKDC-210ENST00000541488 IGLV10-54A0A075B6I4 117 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 OR2AT4A6NND4 320 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 IGLL5B9A064 214 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 RNF113AO15541 343 aaKnown RBP1.17□□□□□ -2.22
PRKDC-210ENST00000541488 GMDSO60547 372 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 CXorf1O96002 111 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 PRB1P04280 392 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 SEC11BP0C7V7 166 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 GZMAP12544 262 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 BGNP21810 368 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 HTR2CP28335 458 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 ACOT2P49753 483 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 DSTNP60981 165 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 IL5RAQ01344 420 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 TAL2Q16559 108 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 CLLU1OSQ5K130 101 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 CLEC18BQ6UXF7 455 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 C3orf22Q8N5N4 141 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 CCNYL1Q8N7R7 359 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 ZFP62Q8NB50 900 aaPredicted RBP1.17□□□□□ -2.22
PRKDC-210ENST00000541488 LY6G5BQ8NDX9 201 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 OR6K2Q8NGY2 324 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 OR8K3Q8NH51 312 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 OR51Q1Q8NH59 317 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 MUC7Q8TAX7 377 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 NDNFQ8TB73 568 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 DOK4Q8TEW6 326 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 PPP1R36Q96LQ0 422 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 OR2V2Q96R30 315 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 C20orf144Q9BQM9 153 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 MAP1LC3CQ9BXW4 147 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 ABCG5Q9H222 651 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 PORCNQ9H237 461 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 SYT4Q9H2B2 425 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 SLC38A1Q9H2H9 487 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 DUSP21Q9H596 190 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 VSIRQ9H7M9 311 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 C12orf4Q9NQ89 552 aa1.17□□□□□ -2.22
PRKDC-210ENST00000541488 NLE1Q9NVX2 485 aaPredicted RBP1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms