RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TCEANCQ8N8B7 351 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 OR13C9Q8NGT0 318 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 RITA1Q96K30 269 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 TEX12Q9BXU0 123 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 OR51J1Q9H342 316 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 GHITMQ9H3K2 345 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 PARP11Q9NR21 331 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 TAGLN3Q9UI15 199 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 ZNF580Q9UK33 172 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 KIAA1109Q2LD37 5005 aa9.06□□□□□ -0.96
COPA-205ENST00000541366 FAM90A10PA6NDY2 464 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 GNGT2O14610 69 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 SOX15O60248 233 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 OR8U9P0C7N5 309 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 OCM2P0CE71 109 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 OCMP0CE72 109 aaPredicted RBP9.05□□□□□ -0.96
COPA-205ENST00000541366 ZNF20P17024 532 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 VHLP40337 213 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 PITPNAQ00169 270 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 PTGES3Q15185 160 aaKnown RBP9.05□□□□□ -0.96
COPA-205ENST00000541366 TP53I3Q53FA7 332 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 LYPD6Q86Y78 171 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 ADGRG5Q8IZF4 528 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 CCDC54Q8NEL0 328 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 OR51A4Q8NGJ6 313 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 CNIH3Q8TBE1 160 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 C10orf35Q96D05 121 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 OR4C12Q96R67 309 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 IL4I1Q96RQ9 567 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 FAM107BQ9H098 131 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 KRT84Q9NSB2 600 aa9.05□□□□□ -0.96
COPA-205ENST00000541366 H2AFY2Q9P0M6 372 aaPredicted RBP9.05□□□□□ -0.96
COPA-205ENST00000541366 TRAV41A0A0B4J266 112 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 HSPA12AO43301 675 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 IGLV1-51P01701 117 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 IGHV3-11P01762 117 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 UBCP0CG48 685 aaKnown RBP9.04□□□□□ -0.96
COPA-205ENST00000541366 TMEM225BP0DP42 221 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 ANXA8P13928 327 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 EPHA2P29317 976 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 BLVRBP30043 206 aaPredicted RBP9.04□□□□□ -0.96
COPA-205ENST00000541366 MTNR1BP49286 362 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 GK3PQ14409 553 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 MMDQ15546 238 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 ZSCAN26Q16670 478 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 PIGYQ3MUY2 71 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 SPATS1Q496A3 300 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 SLC16A12Q6ZSM3 486 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 SAXO1Q8IYX7 474 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 OR10A7Q8NGE5 316 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 OR8H1Q8NGG4 311 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 LINC00476Q8WZB0 136 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
COPA-205ENST00000541366 EME1Q96AY2 570 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 SPSB1Q96BD6 273 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 MBOAT4Q96T53 435 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 RSRP1Q9BUV0 290 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 BARHL1Q9BZE3 327 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 NCOR1P1Q9H4R4 102 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 FBXO7Q9Y3I1 522 aa9.04□□□□□ -0.96
COPA-205ENST00000541366 IGHV7-81A0A0B4J1V7 117 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 C12orf77C9JDV5 145 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
COPA-205ENST00000541366 LGALS1P09382 135 aaKnown RBP9.03□□□□□ -0.96
COPA-205ENST00000541366 NANOS3P60323 173 aaKnown RBP9.03□□□□□ -0.96
COPA-205ENST00000541366 EFNB1P98172 346 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 NDPQ00604 133 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 TRIM25Q14258 630 aaKnown RBP9.03□□□□□ -0.96
COPA-205ENST00000541366 GALEQ14376 348 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 ECSCRQ19T08 205 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 NXNL2Q5VZ03 156 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 MINDY2Q8NBR6 621 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 OR10H4Q8NGA5 316 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 OR10K1Q8NGX5 313 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 OR2G2Q8NGZ5 317 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 TMEM163Q8TC26 289 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 CCDC107Q8WV48 283 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 CANT1Q8WVQ1 401 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 ARL11Q969Q4 196 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 CHCHD6Q9BRQ6 235 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 TMED9Q9BVK6 235 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 FAM118AQ9NWS6 357 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 GNG8Q9UK08 70 aa9.03□□□□□ -0.96
COPA-205ENST00000541366 A0A1W2PN81 502 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 MITFO75030 526 aaPredicted RBP9.02□□□□□ -0.97
COPA-205ENST00000541366 LY6G6CO95867 125 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
COPA-205ENST00000541366 CHRNA7P36544 502 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 DAPP51397 102 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 ZNF134P52741 427 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 TMEM244Q5VVB8 128 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 LPCAT4Q643R3 524 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 ANKRD13BQ86YJ7 626 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 SUMF2Q8NBJ7 301 aa9.02□□□□□ -0.97
COPA-205ENST00000541366 CCDC124Q96CT7 223 aaKnown RBP9.02□□□□□ -0.97
COPA-205ENST00000541366 NABP2Q9BQ15 211 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms