RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PLA2G3Q9NZ20 509 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 F11RQ9Y624 299 aaKnown RBP13.56□□□□□ -0.24
HMGA2-210ENST00000541363 IGKV3OR2-268A0A0C4DH90 116 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 MEF2CQ06413 473 aaPredicted RBP13.56□□□□□ -0.24
HMGA2-210ENST00000541363 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 TREM2Q9NZC2 230 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 ZNF793Q6ZN11 406 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 FIZ1Q96SL8 496 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 RECKO95980 971 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 MDP1Q86V88 176 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 C1QTNF9BB2RNN3 333 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 NAAAQ02083 359 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 RAB33BQ9H082 229 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 KNTC1P50748 2209 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 CTXND1A0A1B0GTU2 59 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 ARF6P62330 175 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 OR10D3Q8NH80 312 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 ZNF418Q8TF45 676 aaPredicted RBP13.56□□□□□ -0.24
HMGA2-210ENST00000541363 TOX2Q96NM4 488 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 SHISA8B8ZZ34 492 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 SKP2Q13309 424 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 C10orf128Q5T292 105 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 ZG16BQ96DA0 208 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 GLRX2Q9NS18 164 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 SLC25A37Q9NYZ2 338 aa13.56□□□□□ -0.24
HMGA2-210ENST00000541363 PHIPQ8WWQ0 1821 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 TCRBV5S2A0A599 114 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 B4GALNT1Q00973 533 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 OR10AC1Q8NH08 325 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 MRGPRX1Q96LB2 322 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 C2orf88Q9BSF0 95 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 DAOP14920 347 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 OR4A5Q8NH83 315 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 ZNF275Q9NSD4 429 aaPredicted RBP13.55□□□□□ -0.24
HMGA2-210ENST00000541363 GHRHP01286 108 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 CRHP06850 196 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 C2orf83Q53S99 150 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 SUMO2P61956 95 aaKnown RBP13.55□□□□□ -0.24
HMGA2-210ENST00000541363 LAMTOR1Q6IAA8 161 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 MRPL16Q9NX20 251 aaKnown RBP13.55□□□□□ -0.24
HMGA2-210ENST00000541363 OR4C45A6NMZ5 311 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 EAF1Q96JC9 268 aaPredicted RBP13.55□□□□□ -0.24
HMGA2-210ENST00000541363 MYOM1P52179 1685 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 C7orf71A4D174 169 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 CCL2P13500 99 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 RPS20P60866 119 aaKnown RBP13.55□□□□□ -0.24
HMGA2-210ENST00000541363 UBALD2Q8IYN6 164 aa13.55□□□□□ -0.24
HMGA2-210ENST00000541363 C7orf77A4D0Y5 90 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 S1PR2O95136 353 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 DEGS2Q6QHC5 323 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 RIMKLAQ8IXN7 391 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 DIRC2Q96SL1 478 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 HYPMO75409 117 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 OR8G5Q8NG78 346 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 HDHD3Q9BSH5 251 aaPredicted RBP13.54□□□□□ -0.24
HMGA2-210ENST00000541363 MS4A7Q9GZW8 240 aaPredicted RBP13.54□□□□□ -0.24
HMGA2-210ENST00000541363 DPH3P1Q9H4G8 78 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 CACNA1SQ13698 1873 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 IGLV3-10A0A075B6K4 115 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 LEPROTL1O95214 131 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 MT-ND6P03923 174 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 FOLR2P14207 255 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
HMGA2-210ENST00000541363 C17orf51A8MQB3 221 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 PITX3O75364 302 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 AMY1AP04745 511 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 PTPMT1Q8WUK0 201 aaPredicted RBP13.54□□□□□ -0.24
HMGA2-210ENST00000541363 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 ABLIM3O94929 683 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 FCGR3AP08637 254 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 TFPI2P48307 235 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 IL11RAQ14626 422 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 SSPNQ14714 243 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 FGF14Q92915 247 aa13.54□□□□□ -0.24
HMGA2-210ENST00000541363 TRAV39A0A0B4J263 110 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 GZMHP20718 246 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 SURF2Q15527 256 aaPredicted RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 TMEM95Q3KNT9 176 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 SLC25A34Q6PIV7 304 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 ALKAL1Q6UXT8 129 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 A0A0A6YYD5 115 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 ANKRD20A5PA0PJZ0 165 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RBMY1BA6NDE4 496 aaKnown RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RBMY1EA6NEQ0 496 aaKnown RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RBMY1DP0C7P1 496 aaKnown RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 ZBTB34Q8NCN2 500 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 GNRHR2Q96P88 292 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 NUP98P52948 1817 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 ASB16Q96NS5 453 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 SGMS2Q8NHU3 365 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 TRAF4Q9BUZ4 470 aaPredicted RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 J3QR06 171 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 SYNGR1O43759 233 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 PLAUP00749 431 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 NUBP1P53384 320 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms