RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260	CMTM3	Q96MX0	182 aa		13.82	□□□□□ -0.2
CCDC189-204	ENST00000541260	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
CCDC189-204	ENST00000541260	CALY	Q9NYX4	217 aa		13.82	□□□□□ -0.2
CCDC189-204	ENST00000541260	AK3	Q9UIJ7	227 aa		13.82	□□□□□ -0.2
CCDC189-204	ENST00000541260	TRAPPC2L	Q9UL33	140 aa		13.82	□□□□□ -0.2
CCDC189-204	ENST00000541260	TRBV6-6	A0A0A6YYG2	114 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	IGHV1-69D	A0A0B4J2H0	117 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	SERPINE3	A8MV23	424 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	MFNG	O00587	321 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	IGHV1-69	P01742	117 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	CDK2	P24941	298 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	TUSC1	Q2TAM9	212 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	C6orf183	Q5T699	404 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	OR52W1	Q6IF63	320 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	OR4K15	Q8NH41	348 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	DYNC2LI1	Q8TCX1	351 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	CCDC107	Q8WV48	283 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	SESN1	Q9Y6P5	492 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	KIAA2026	Q5HYC2	2103 aa		13.81	□□□□□ -0.2
CCDC189-204	ENST00000541260	TRAV39	A0A0B4J263	110 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	C15orf65	H3BRN8	121 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	MMP23A	O75900	390 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	EPHA1	P21709	976 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	SOX6	P35712	828 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	DLX1	P56177	255 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	UBE2NL	Q5JXB2	153 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	ZNF880	Q6PDB4	577 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	ZNF782	Q6ZMW2	699 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	SAMD12	Q8N8I0	201 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	OR13D1	Q8NGV5	346 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	PHF21A	Q96BD5	680 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	RAB9B	Q9NP90	201 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	C12orf4	Q9NQ89	552 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	IGHV3OR16-10	A0A075B7F0	116 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260		A0A087X0M5	115 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	SMIM31	A0A1B0GVY4	71 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260		A0A1B0GX30	115 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	GNB3	P16520	340 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	RCC1	P18754	421 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	FPR2	P25090	351 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	KLRD1	Q13241	179 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	CDNF	Q49AH0	187 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	OLFML2A	Q68BL7	652 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	OR11H6	Q8NGC7	330 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	S100A16	Q96FQ6	103 aa	Known RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	KIRREL1	Q96J84	757 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	CMSS1	Q9BQ75	279 aa	Known RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	TMEM133	Q9H2Q1	129 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	DIABLO	Q9NR28	239 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	IDI2-AS1	Q9NZ38	188 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	CCDC59	Q9P031	241 aa	Known RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	NDUFA13	Q9P0J0	144 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	COMMD3	Q9UBI1	195 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	ZNF69	Q9UC07	566 aa		13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	RSL24D1	Q9UHA3	163 aa	Known RBP	13.8	□□□□□ -0.2
CCDC189-204	ENST00000541260	CCDC160	A6NGH7	325 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	C12orf77	C9JDV5	145 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	GSTP1	P09211	210 aa	Known RBP	13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	OMG	P23515	440 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	CD34	P28906	385 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	SSTR5	P35346	364 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	GDNF	P39905	211 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	PRB3	Q04118	309 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	ZNF260	Q3ZCT1	412 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	PRAMEF5	Q5TYX0	476 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	MZT2A	Q6P582	158 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	BRD3OS	Q6XYD6	125 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	MOB1B	Q7L9L4	216 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	OR52M1	Q8NGK5	317 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	RFESD	Q8TAC1	157 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	ARL11	Q969Q4	196 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	KCNIP1	Q9NZI2	227 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	MGAT4A	Q9UM21	535 aa		13.79	□□□□□ -0.2
CCDC189-204	ENST00000541260	F2RL2	O00254	374 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	SPINT2	O43291	252 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	APOA1	P02647	267 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	CD3G	P09693	182 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	PNLIPRP3	Q17RR3	467 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	TMEM30B	Q3MIR4	351 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	MIDN	Q504T8	468 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260		Q6ZPA2	131 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	PDZD9	Q8IXQ8	264 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	PIP4P2	Q8N4L2	257 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	ZMAT3	Q9HA38	289 aa	Known RBP	13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260	TAF9B	Q9HBM6	251 aa		13.78	□□□□□ -0.2
CCDC189-204	ENST00000541260		A0A075B6Q4	140 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	IGHV2-26	A0A0B4J1V2	119 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	ODF3B	A8MYP8	253 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	NPFF	O15130	113 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	XRCC3	O43542	346 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	MRPS15	P82914	257 aa	Known RBP	13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	HACD4	Q5VWC8	232 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	RUSC1-AS1	Q66K80	236 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	ZNF626	Q68DY1	528 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	BCL6B	Q8N143	479 aa	Predicted RBP	13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	PNKD	Q8N490	385 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	CLEC7A	Q9BXN2	247 aa		13.77	□□□□□ -0.21
CCDC189-204	ENST00000541260	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms