RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FIP1L1	Q6UN15	594 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WFDC8	Q8IUA0	241 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM217	Q8N7C4	229 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CPEB3	Q8NE35	698 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MISP3	Q96FF7	219 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	KCNK17	Q96T54	332 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	S100A13	Q99584	98 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAAP24	Q9BTP7	215 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	REPIN1	Q9BWE0	567 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PLEKHJ1	Q9NW61	149 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TRANK1	O15050	2925 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NAV2	Q8IVL1	2488 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		E5RGE8	158 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SCGN	O76038	276 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GOSR1	O95249	250 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CNOT4	O95628	575 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CD3E	P07766	207 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SEC11B	P0C7V7	166 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR5H8	P0DN80	308 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DDT	P30046	118 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TIMP3	P35625	211 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	P2RY1	P47900	373 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TAS2R46	P59540	309 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	KISS1	Q15726	138 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	UBE2V2	Q15819	145 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ACSF3	Q4G176	576 aa	Predicted RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ABCA11P	Q4W5N1	156 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FBXW12	Q6X9E4	464 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C5orf24	Q7Z6I8	188 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF429	Q86V71	674 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CYB561D1	Q8N8Q1	229 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	YPEL4	Q96NS1	127 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SSX3	Q99909	188 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OPA3	Q9H6K4	179 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	UNKL	Q9H9P5	680 aa	Known RBP	4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WASF3	Q9UPY6	502 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NSG2	Q9Y328	171 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LHFPL6	Q9Y693	200 aa		4.89	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CFAP54	Q96N23	3096 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WDFY3	Q8IZQ1	3526 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RBFOX3	A6NFN3	312 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LIPT2	A6NK58	231 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	AQP7P3	A6NL99	342 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		F5H5K5	113 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DHH	O43323	396 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TRGC1	P0CF51	173 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FAH	P16930	419 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RUNX1	Q01196	453 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SSX2	Q16385	188 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TAF9	Q16594	264 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CLEC12B	Q2HXU8	276 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ABHD5	Q8WTS1	349 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FRZB	Q92765	325 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RNASE6	Q93091	150 aa	Known RBP	4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PLEKHA2	Q9HB19	425 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	KLHL13	Q9P2N7	655 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A0J9YW62	118 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SEC14L6	B5MCN3	397 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GEMIN2	O14893	280 aa	Known RBP	4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CST7	O76096	145 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DBH	P09172	617 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PGA4	P0DJD7	388 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PGA5	P0DJD9	388 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CCNO	P22674	350 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GNLY	P22749	145 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RAB1A	P62820	205 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DEGS2	Q6QHC5	323 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C1orf174	Q8IYL3	243 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GCNT2	Q8N0V5	402 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM123	Q8N131	208 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FBXL14	Q8N1E6	418 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST3H2BB	Q8N257	126 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HPSE2	Q8WWQ2	592 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GALNT14	Q96FL9	552 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SNX22	Q96L94	193 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GINS3	Q9BRX5	216 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ATG101	Q9BSB4	218 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PLEK2	Q9NYT0	353 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ANAPC10	Q9UM13	185 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC7A11	Q9UPY5	501 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	KCNIP3	Q9Y2W7	256 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CRYM-AS1	A6NIL9	109 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HSD17B6	O14756	317 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC31A2	O15432	143 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GPR137B	O60478	399 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IRF2	P14316	349 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SELE	P16581	610 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MSR1	P21757	451 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ATP6V0C	P27449	155 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FBXW9	Q5XUX1	488 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	REC114	Q7Z4M0	266 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C1QL4	Q86Z23	238 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TGIF2LX	Q8IUE1	241 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	AK3	Q9UIJ7	227 aa		4.88	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CREBBP	Q92793	2442 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LRRC3C	A6NJW4	275 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR5H1	A6NKK0	313 aa		4.87	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		K7N7A8	449 aa		4.87	□□□□□ -1.63

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