RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 IGHV3-13P01766 116 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 FAM87AP0C7U9 286 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 CD200P41217 278 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 PCSK4Q6UW60 755 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 LRP11Q86VZ4 500 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 OR1S1Q8NH92 325 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 LRRC29Q8WV35 223 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
TSFM-207ENST00000540550 SNRNP40Q96DI7 357 aaKnown RBP12.54□□□□□ -0.4
TSFM-207ENST00000540550 CNTNAP3BQ96NU0 1288 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 TP53RKQ96S44 253 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
TSFM-207ENST00000540550 CNTNAP3Q9BZ76 1288 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 CCL28Q9NRJ3 127 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 KCNIP1Q9NZI2 227 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 DNAJB11Q9UBS4 358 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 ZNF835Q9Y2P0 537 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 AUP1Q9Y679 476 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 NPIPB11E5RHQ5 1161 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 SELENOVP59797 346 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 NKX6-1P78426 367 aaPredicted RBP12.54□□□□□ -0.4
TSFM-207ENST00000540550 PRR30Q53SZ7 412 aaPredicted RBP12.54□□□□□ -0.4
TSFM-207ENST00000540550 LYZL2Q7Z4W2 148 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 PRR18Q8N4B5 295 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
TSFM-207ENST00000540550 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 ASF1BQ9NVP2 202 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
TSFM-207ENST00000540550 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
TSFM-207ENST00000540550 C16orf97H3BN30 126 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 DLL1O00548 723 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 HSPA12AO43301 675 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 LMO1P25800 156 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 MSMPQ1L6U9 139 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 TMEM268Q5VZI3 342 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 FAM219AQ8IW50 185 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 PRR7Q8TB68 274 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 WIPI2Q9Y4P8 454 aa12.53□□□□□ -0.4
TSFM-207ENST00000540550 LSM5Q9Y4Y9 91 aaKnown RBP12.53□□□□□ -0.4
TSFM-207ENST00000540550 ZSCAN5BA6NJL1 495 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 HMGN3Q15651 99 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 ZNF695Q8IW36 515 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 SLC35G3Q8N808 338 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 OR10V1Q8NGI7 309 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 OR10Z1Q8NGY1 313 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 PHYHIPLQ96FC7 376 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 ZFP57Q9NU63 452 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 MBNL3Q9NUK0 354 aaKnown RBP12.52□□□□□ -0.4
TSFM-207ENST00000540550 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.4
TSFM-207ENST00000540550 RAXQ9Y2V3 346 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 SPTBN4Q9H254 2564 aa12.52□□□□□ -0.4
TSFM-207ENST00000540550 A0A1B0GW55 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 IFNL4K9M1U5 179 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 PSPNO60542 156 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DEDDO75618 318 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.41
TSFM-207ENST00000540550 NMBP08949 121 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4L2P0CJ85 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 RRASP10301 218 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 CD40P25942 277 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 SLC35E4Q6ICL7 350 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 PDZD9Q8IXQ8 264 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 TMEM171Q8WVE6 324 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DNTTIP1Q9H147 329 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 TAF9BQ9HBM6 251 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 DUX4Q9UBX2 424 aa12.52□□□□□ -0.41
TSFM-207ENST00000540550 C1QTNF9BB2RNN3 333 aa12.51□□□□□ -0.41
TSFM-207ENST00000540550 CCKARP32238 428 aa12.51□□□□□ -0.41
TSFM-207ENST00000540550 COL10A1Q03692 680 aa12.51□□□□□ -0.41
TSFM-207ENST00000540550 TMEM56Q96MV1 263 aa12.51□□□□□ -0.41
TSFM-207ENST00000540550 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
TSFM-207ENST00000540550 RBM7Q9Y580 266 aaKnown RBP12.51□□□□□ -0.41
TSFM-207ENST00000540550 TMEM56-RWDD3S4R434 201 aa12.51□□□□□ -0.41
TSFM-207ENST00000540550 IGLV3-9A0A075B6K5 115 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 H0Y980 276 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 K7EPK0 472 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 TNFSF12O43508 249 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 SPRY3O43610 288 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 PGLYRP1O75594 196 aaPredicted RBP12.5□□□□□ -0.41
TSFM-207ENST00000540550 TPT1P13693 172 aaKnown RBP12.5□□□□□ -0.41
TSFM-207ENST00000540550 TMEM108Q6UXF1 575 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 WFDC8Q8IUA0 241 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 FAM71E2Q8N5Q1 922 aa12.5□□□□□ -0.41
TSFM-207ENST00000540550 BOLLQ8N9W6 283 aaKnown RBP12.5□□□□□ -0.41
TSFM-207ENST00000540550 RELL2Q8NC24 303 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms