RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 HSPB9Q9BQS6 159 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 CHCHD6Q9BRQ6 235 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 BARHL1Q9BZE3 327 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 KIF25Q9UIL4 384 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 VSIG4Q9Y279 399 aa9.02□□□□□ -0.97
CLSTN3-209ENST00000539982 A0A1W2PPE3 182 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 METTL15A6NJ78 407 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 MITFO75030 526 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 MOSP00540 346 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 CD1BP29016 333 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 SOX6P35712 828 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 REG1BP48304 166 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 CRISP1P54107 249 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 CDK5R1Q15078 307 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 ZIK1Q3SY52 487 aaPredicted RBP9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 AADACL4Q5VUY2 407 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 NXNL2Q5VZ03 156 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 SAXO1Q8IYX7 474 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 RDH10Q8IZV5 341 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 PRSS35Q8N3Z0 413 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 ZNF555Q8NEP9 628 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 OR6Q1Q8NGQ2 317 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 CYGBQ8WWM9 190 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 RFT1Q96AA3 541 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 SPSB1Q96BD6 273 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 FGGYQ96C11 551 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 OPALINQ96PE5 141 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 GABARAPL3Q9BY60 117 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 KLK15Q9H2R5 256 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 GHITMQ9H3K2 345 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 RIBC2Q9H4K1 309 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 GNB4Q9HAV0 340 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 FAM118AQ9NWS6 357 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 ENOPH1Q9UHY7 261 aa9.01□□□□□ -0.97
CLSTN3-209ENST00000539982 LOC107986453A0A1B0GWG9 222 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 MAGEA13PA6NCF6 341 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 A8MZ25 164 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 SULT1C4O75897 302 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 UBCP0CG48 685 aaKnown RBP9□□□□□ -0.97
CLSTN3-209ENST00000539982 IGHV4-30-4P0DP06 118 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 PPIFP30405 207 aaKnown RBP9□□□□□ -0.97
CLSTN3-209ENST00000539982 ZP1P60852 638 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 ISL1P61371 349 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 GNB1P62873 340 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 ADARB1P78563 741 aaKnown RBP9□□□□□ -0.97
CLSTN3-209ENST00000539982 EFNB1P98172 346 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 MED21Q13503 144 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 PTGES3Q15185 160 aaKnown RBP9□□□□□ -0.97
CLSTN3-209ENST00000539982 SRSF7Q16629 238 aaKnown RBP eCLIP9□□□□□ -0.97
CLSTN3-209ENST00000539982 TTC23Q5W5X9 447 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 FAM53AQ6NSI3 398 aaPredicted RBP9□□□□□ -0.97
CLSTN3-209ENST00000539982 TMEM104Q8NE00 496 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 DLX4Q92988 240 aaPredicted RBP9□□□□□ -0.97
CLSTN3-209ENST00000539982 CNBD2Q96M20 576 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 OR5B12Q96R08 314 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 TBX5Q99593 518 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 ANKRD60Q9BZ19 345 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 OR51J1Q9H342 316 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
CLSTN3-209ENST00000539982 LOC100130705A0A1B0GUX0 176 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 A0A1W2PQL4 384 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 HSPB6O14558 160 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 SLC16A6O15403 523 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 IGLV1-40P01703 118 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 MT-ND2P03891 347 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 OR2T7P0C7T2 308 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 OCM2P0CE71 109 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 OCMP0CE72 109 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 ZNF20P17024 532 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 RAB9AP51151 201 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 F2RL1P55085 397 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 GALEQ14376 348 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 PAN3Q58A45 887 aaKnown RBP8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 TMEM244Q5VVB8 128 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 RSBN1Q5VWQ0 802 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 ACSM6Q6P461 480 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 Q8N1Y9 231 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 LINC00311Q8N616 119 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 TCEANCQ8N8B7 351 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 OR5D18Q8NGL1 313 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 MRGPRDQ8TDS7 321 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 RTN4IP1Q8WWV3 396 aaPredicted RBP8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 ST6GALNAC6Q969X2 333 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 SPACA5Q96QH8 159 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 SPATA25Q9BR10 227 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 PRRG3Q9BZD7 231 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 NEK6Q9HC98 313 aa8.99□□□□□ -0.97
CLSTN3-209ENST00000539982 TRAV24A0A0B4J272 114 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 FAM90A10PA6NDY2 464 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 ZNF736B4DX44 427 aaPredicted RBP8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 GNAO1P09471 354 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 TMEM225BP0DP42 221 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 DBTP11182 482 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 GZMHP20718 246 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 MYF6P23409 242 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 SSTR5P35346 364 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 POLR2IP36954 125 aaKnown RBP8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 KIR3DL2P43630 455 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 MTNR1BP49286 362 aa8.98□□□□□ -0.97
CLSTN3-209ENST00000539982 PAX5Q02548 391 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms