RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZNF17P17021 662 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF43P17038 809 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BOP23527 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 GABRR1P24046 479 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 UCP1P25874 307 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 BLVRBP30043 206 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BBP33778 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 TAGLN2P37802 199 aaKnown RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 FOLR3P41439 243 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 AKR1C3P42330 323 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BDP58876 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 LSM6P62312 80 aaKnown RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BCP62807 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NKX6-1P78426 367 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 H3F3AP84243 136 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 TLE4Q04727 773 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF616Q08AN1 781 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 JOSD1Q15040 202 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OR8B8Q15620 311 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST2H2BEQ16778 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 C3orf36Q3SXR2 165 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NCMAPQ5T1S8 102 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 SPSB3Q6PJ21 355 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 SLC25A47Q6Q0C1 308 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 FIP1L1Q6UN15 594 aaKnown RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ASCL4Q6XD76 172 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF429Q86V71 674 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 FBXL14Q8N1E6 418 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 CCDC71LQ8N9Z2 235 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OR4D5Q8NGN0 318 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OR10S1Q8NGN2 331 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OR10D4PQ8NGN7 298 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 OR6X1Q8NH79 312 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 AKR7LQ8NHP1 331 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BHQ93079 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 MRPL24Q96A35 216 aaKnown RBP6.6□□□□□ -1.35
CCDC60-204ENST00000539847 DDIT4LQ96D03 193 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 RAB39BQ96DA2 213 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 LURAP1Q96LR2 239 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 JMJD8Q96S16 334 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 P2RX4Q99571 388 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BNQ99877 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 HIST1H2BMQ99879 126 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NICN1Q9BSH3 213 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NELFAQ9H3P2 528 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 WDR54Q9H977 334 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 NECAP2Q9NVZ3 263 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ALKBH4Q9NXW9 302 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ANXA10Q9UJ72 324 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 VDAC3Q9Y277 283 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 V9GYS6 101 aa6.6□□□□□ -1.35
CCDC60-204ENST00000539847 ABCA2Q9BZC7 2435 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF726A6NNF4 738 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 CLDN34H7C241 214 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 NME2P1O60361 137 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 NUDT14O95848 222 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 GCGP01275 180 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 HCKP08631 526 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 OR5AC1P0C628 307 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF728P0DKX0 622 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 DAOP14920 347 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 RAB4AP20338 218 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 FGF7P21781 194 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF121P58317 390 aaPredicted RBP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 RND3P61587 244 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 HLA-DRB3P79483 266 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 DLK1P80370 383 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 C17orf67Q0P5P2 114 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 MALLQ13021 153 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 OR8G1Q15617 311 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 KISS1Q15726 138 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF674Q2M3X9 581 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 AKIRIN2Q53H80 203 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 C9orf152Q5JTZ5 239 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ABLIM2Q6H8Q1 611 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 Q6ZS49 121 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 CENPVQ7Z7K6 275 aaPredicted RBP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 TGIF2LYQ8IUE0 185 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 TMEM156Q8N614 296 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 OR14L1PQ8NHC6 308 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 OR51E1Q8TCB6 317 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 RNF138Q8WVD3 245 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 HAS2Q92819 552 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 MSI2Q96DH6 328 aaKnown RBP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 NEU1Q99519 415 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 GPER1Q99527 375 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 PYGO2Q9BRQ0 406 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF2Q9BSG1 426 aaPredicted RBP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 VAX2Q9UIW0 290 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 NXT1Q9UKK6 140 aaKnown RBP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 RNF150Q9ULK6 438 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 LSM5Q9Y4Y9 91 aaKnown RBP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 PUS1Q9Y606 427 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC60-204ENST00000539847 ZGRF1Q86YA3 2104 aa6.59□□□□□ -1.35
CCDC60-204ENST00000539847 SPG11Q96JI7 2443 aa6.58□□□□□ -1.36
CCDC60-204ENST00000539847 PCNX1Q96RV3 2341 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms