RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 RPEQ96AT9 228 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 NEIL1Q96FI4 390 aaPredicted RBP12.68□□□□□ -0.38
CACNB1-206ENST00000539338 CCL19Q99731 98 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 PARD6AQ9NPB6 346 aa12.68□□□□□ -0.38
CACNB1-206ENST00000539338 LTBP1Q14766 1721 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 A0A0J9YW62 118 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 HLA-GP17693 338 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.67□□□□□ -0.38
CACNB1-206ENST00000539338 CD200R1LQ6Q8B3 271 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 STPG2Q8N412 459 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 ZNF488Q96MN9 340 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 TSPAN2O60636 221 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 FOXO1Q12778 655 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 ATP6V1FQ16864 119 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 SLC25A38Q96DW6 304 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 VAMP8Q9BV40 100 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 SF3B6Q9Y3B4 125 aaKnown RBP12.67□□□□□ -0.38
CACNB1-206ENST00000539338 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 FCN1O00602 326 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 F12P00748 615 aaPredicted RBP12.67□□□□□ -0.38
CACNB1-206ENST00000539338 PMS2P11Q13670 270 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 OR1K1Q8NGR3 316 aa12.67□□□□□ -0.38
CACNB1-206ENST00000539338 hADV38S2A0JD32 116 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 SP1P08047 785 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 BSXQ3C1V8 233 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 DHRS7BQ6IAN0 325 aaPredicted RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 DTD1Q8TEA8 209 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 OR5H1A6NKK0 313 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 MRPS11P82912 194 aaKnown RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 ZP4Q12836 540 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 BCL2L2Q92843 193 aaPredicted RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 NOL4LQ96MY1 436 aaPredicted RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 OR6C3Q9NZP0 311 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 FAM186AA6NE01 2351 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 OOEPA6NGQ2 149 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 Q56UQ5 140 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 RNASEKQ6P5S7 137 aaKnown RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 ALX4Q9H161 411 aaPredicted RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 SPTBP11277 2137 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 TUSC1Q2TAM9 212 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 OR2M7Q8NG81 312 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 ZNF418Q8TF45 676 aaPredicted RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 PTX4Q96A99 478 aa12.66□□□□□ -0.38
CACNB1-206ENST00000539338 RCC2Q9P258 522 aaKnown RBP12.66□□□□□ -0.38
CACNB1-206ENST00000539338 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 J3QT63 122 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 PIN1P1O15428 100 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
CACNB1-206ENST00000539338 PSG2P11465 335 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 MEOX2P50222 304 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 MS4A5Q9H3V2 200 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 OR2W1Q9Y3N9 320 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 RPL36A-HNRNPH2H7BZ11 118 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 G6PCP35575 357 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 KIR2DS2P43631 304 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 DLK1P80370 383 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 MOGAT3Q86VF5 341 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 OR4S2Q8NH73 311 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 GPX7Q96SL4 187 aaPredicted RBP12.65□□□□□ -0.38
CACNB1-206ENST00000539338 MSL2Q9HCI7 577 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 AP4M1O00189 453 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 SIGLEC5O15389 551 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 TMPRSS2O15393 492 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 TMEM50BP56557 158 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 ZNF345Q14585 488 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 VAMP3Q15836 100 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 IQCJQ1A5X6 159 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 SLC25A40Q8TBP6 338 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 SSMEM1Q8WWF3 244 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 SH2D2AQ9NP31 389 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 KCNMB2Q9Y691 235 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 SMAD7O15105 426 aaKnown RBP12.65□□□□□ -0.38
CACNB1-206ENST00000539338 ORM2P19652 201 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 SULT1A1P50225 295 aa12.65□□□□□ -0.38
CACNB1-206ENST00000539338 HSD17B10Q99714 261 aaKnown RBP12.65□□□□□ -0.38
CACNB1-206ENST00000539338 CACNA1IQ9P0X4 2223 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 LY86O95711 162 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 FGF5P12034 268 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 FSTP19883 344 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 KLHDC1Q8N7A1 406 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 MS4A10Q96PG2 267 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 CEP290O15078 2479 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 CDS2O95674 445 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 FCARP24071 287 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 OR5A2Q8NGI9 324 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 OR1L4Q8NGR5 311 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 AAMDCQ9H7C9 122 aa12.64□□□□□ -0.39
CACNB1-206ENST00000539338 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms